Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01199 ATGGCTGATATATTCGCGTGGCTCTTCTCCTTCTTCACCCTTATTGCTTTAATCGTACTCGTTATTTACCAGTTGATGTGCCTGGCAGACCTTGAATTCGATTATATAAATCCTTATGATTCCTCGTCTCGAATAAACAAAGTTGTTTTGCCTGAGTATATTACATTAGGTGTCCTGTGCTGCTTCTATCTTGTAACAGGGCACTGGATAATGTCACTGTTCTGCGCTCCTTACGCCTACTACAATGTTAGATTGTACAGACAAGGAAAGCATCTGGTTGATGTTACGGAGATATTCAACATGCTCCCTCGGGAAAAGAAGCAGCGGCTTTTCAAACTCTTCTATCTAATTTTCATCCTATTCGTCTCCTTATTTTGGTTGATCTACACAACATTGGACGATGATTATGATTAG 414 0.401 MADIFAWLFSFFTLIALIVLVIYQLMCLADLEFDYINPYDSSSRINKVVLPEYITLGVLCCFYLVTGHWIMSLFCAPYAYYNVRLYRQGKHLVDVTEIFNMLPREKKQRLFKLFYLIFILFVSLFWLIYTTLDDDYD 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01199 137 Pfam Cornichon protein 5 125 IPR003377 GO:0016192
Car07g01199 137 PANTHER CORNICHON FAMILY PROTEIN 1 135 - -
Car07g01199 137 SMART Cornichon_2 4 125 IPR003377 GO:0016192
Car07g01199 137 PANTHER CORNICHON-RELATED 1 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01199 Car-Chr7 10772077 10775302 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01199 K20368 - gmx:100799061 244.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01199 07 10772077 10775302 Car07g01199 07 10772077 10775302 ECH
Car07g01199 07 10772077 10775302 Car08g00271 08 2166792 2168387 PCT