Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01158 ATGAACTCTCGTGAAGTTACTCTAGTCGCCACGGCAACCATGTTTGGTGCCTTGGCCTCATCAATCGCTCTCCGTTTCCTCTGCCGTTCCCAAACTCACACATCCAAAACCAAACCCTCGCAAAACGGCACCGTTTCCTCTTCTGGAGACCCGTTCGACCCCTCCAAACGCAAAGGATACTTGTCTTGGGATGATTATTTCATGGCAATTGCGTTTTTGTCAGCTGAAAGATCCAAAGACCCTTACAGGCAGGTGGGTGCTTGCTTAGTGAGTCAAGATGGTATAATTCTTGGCATTGGTTATAATGGATTTCCAAGAGGTTGTTCTGATGACAAGCTACCATGGGCCAAGAAATCTAGGACTGGGAATCCCTTGGAGACTAAGTACCCTTATGTTTGTCATGCAGAAGTAAATGCTATTCTTAACACAAATCATGCCTCTGCTGCTGGACAACGGCTGTATGTGACCATGTTTCCTTGCAATGAGTGCGCCAAGATCATAATCCAGTCAGGAGTTTCTGAAGTAATTTATTATGTGGAGAAGAGATTAGAAAATTCAGATGTTGCATATATTGCCTCTCACAAGCTACTTTCATTGGCTGGTGTAAAGGTCAGGAAACACCAACCAGCGATGAGTGAAATTCATCTGAAGTATGAGGAGCTGTAG 666 0.4474 MNSREVTLVATATMFGALASSIALRFLCRSQTHTSKTKPSQNGTVSSSGDPFDPSKRKGYLSWDDYFMAIAFLSAERSKDPYRQVGACLVSQDGIILGIGYNGFPRGCSDDKLPWAKKSRTGNPLETKYPYVCHAEVNAILNTNHASAAGQRLYVTMFPCNECAKIIIQSGVSEVIYYVEKRLENSDVAYIASHKLLSLAGVKVRKHQPAMSEIHLKYEEL 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01158 221 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 134 167 IPR016192 GO:0008270|GO:0016787
Car07g01158 221 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 62 204 IPR002125 -
Car07g01158 221 SUPERFAMILY Cytidine deaminase-like 64 208 IPR016193 GO:0003824
Car07g01158 221 CDD deoxycytidylate_deaminase 64 177 IPR035105 -
Car07g01158 221 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 62 178 IPR002125 -
Car07g01158 221 PANTHER CYTIDINE/DEOXYCYTIDYLATE DEAMINASE FAMILY PROTEIN 1 220 - -
Car07g01158 221 Gene3D Cytidine Deaminase, domain 2 54 221 - -
Car07g01158 221 PANTHER DEOXYCYTIDYLATE DEAMINASE-RELATED 1 220 IPR015517 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01158 K01493 - gmx:100792003 392.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01158 07 10401576 10406260 Car07g01158 07 10401576 10406260 ECH