Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01139 ATGGCTCTGTTTCTTCTCTTCGAAGCCGCTAATGGTTACGCCTTGTTCGAAGCTCACGGTATTGACGAGATCGGTCAGAACACCGAAGCTGTTAGGAACTCCGTTACGGATTTGAATAGGTTCGGTAAAGTTGTTAAGCTTCGCTCTTTCAACCCTTTCACCTCTGCTCTTGATGCACTCGAACAAGTTAACGCCGTCACCGAAGgtgttATGACTGACGAGCTAAGGACTGTTTTGGAGACTAACTTACCTAAAGTGAAGGAAGGTAAAAAGCCAAAGTTCTCATTAGGTGTAGCTGAATCTAAGCTTGGTTCACAGATCCATGACGTGACTAAAATTCCATGCCAATGTAACGAGTTTGTGGGCGAACTTCTTCGTGGTGTCAGGCAACATTTTGTTGATTCTGTTGGTGATCTCAAGCCAGGAGATTTGATAAAAGCACAACTTGGTCTGAGCCACAGTTACAGCAGAGCAAAGGTGAAATTCAATGTTAATCGGGTTGACAATATGGTCATTCAAGCAATCTTTCTTCTTGATACTCTTGATAAGGATATCAATTCATTCTCCATGAGAGTCAGAGAGTGGTATTCGTGGCATTTTCCTGAACTGGTGAAAATTGTAAATGATAATTATCTGTATTGCAAAGTGGCAAAATTTATTGAGGACAAATCAAAGTTGTCTGAAGACAAGCTTGAAGGCTTAACTGACCAAGTTGGAGATGAAGATAAAGCAAAGGAGATTATTGAAGCTGCCAAAGCCTCCATGGGACAGGATTTGTCCCCTGTTGACTTGATCAATGTTCATATGTTTGCACAGAGGGTGATGGACCTATCTGATTACAGAAGAAGATTGTATGATTACCTGACCACTAAAATGAATGACATTGCACCAAATTTGGCTTCTTTAATTGGTGAAGTTGTTGGTGCACGTTTAATTTCCCATGCTGGTAGCCTCACAAATTTAGCCAAGTGCCCCTCTTCAACTCTTCAGATTCTTGGTGCAGAAAAGGCTTTGTTCAGGGCATTAAAAACAAGAGGAAACACTCCCAAATATGGTCTGATATTCCACTCTTCTTTTATTGGTCGAGCTTCTGCCAAAAATAAGGGCCGAATGGCTCGCTATCTTGCAAACAAGTGCTCAATTGCATCACGGATAGACTGCTTTTCTGAAAACGGTAGTACGATATTTGGGGAGAAACTCCGTGAGCAAGTTGAGGAGCGACTTGACTTTTATGATAAGGGAGTTGCCCCTCGCAAGAACATAGATGTCATGAAATCTGCTATTGAAATTGCTGATAACAAAGATACAGAAATGGAAACAGAAGAAGCTTCAGCCAAGAAATCCAAGAAGAAGAAGCAAAAAGCCACAGATGAGGATGACATGGCTGTAGATAATGCTGCAGAAGTTACAAATGGTGATGCAACGGAGGATCATAAATCagaaaagaagaaaaagaagaaagaaaagagaaaagtagaCCTAGAGGTTGAAACCCAGGATCCTTCTGTAGATGAAGGTGCCAATGGGGATTCAAGTAAGAAGAAGAAAAAGAAATCCAAAAGGATGGATGTCGATTAA 1578 0.4037 MALFLLFEAANGYALFEAHGIDEIGQNTEAVRNSVTDLNRFGKVVKLRSFNPFTSALDALEQVNAVTEGVMTDELRTVLETNLPKVKEGKKPKFSLGVAESKLGSQIHDVTKIPCQCNEFVGELLRGVRQHFVDSVGDLKPGDLIKAQLGLSHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVNDNYLYCKVAKFIEDKSKLSEDKLEGLTDQVGDEDKAKEIIEAAKASMGQDLSPVDLINVHMFAQRVMDLSDYRRRLYDYLTTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASAKNKGRMARYLANKCSIASRIDCFSENGSTIFGEKLREQVEERLDFYDKGVAPRKNIDVMKSAIEIADNKDTEMETEEASAKKSKKKKQKATDEDDMAVDNAAEVTNGDATEDHKSEKKKKKKEKRKVDLEVETQDPSVDEGANGDSSKKKKKKSKRMDVD 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01139 525 ProSiteProfiles Nop domain profile. 295 413 IPR002687 -
Car07g01139 525 Pfam snoRNA binding domain, fibrillarin 177 409 IPR002687 -
Car07g01139 525 Coils Coil 438 458 - -
Car07g01139 525 MobiDBLite consensus disorder prediction 471 498 - -
Car07g01139 525 Pfam NOP5NT (NUC127) domain 4 69 IPR012974 -
Car07g01139 525 SMART NOSIC_2 170 222 IPR012976 -
Car07g01139 525 SUPERFAMILY Nop domain 163 412 IPR036070 -
Car07g01139 525 Gene3D - 141 298 - -
Car07g01139 525 PANTHER NOP56-LIKE PRE RNA PROCESSING RIBONUCLEOPROTEIN 1 521 - -
Car07g01139 525 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 1 521 IPR045056 GO:0030515|GO:0031428|GO:0032040
Car07g01139 525 MobiDBLite consensus disorder prediction 434 461 - -
Car07g01139 525 MobiDBLite consensus disorder prediction 434 525 - -
Car07g01139 525 Gene3D Nop domain 299 425 IPR042239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01139 Car-Chr7 10164121 10167376 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01139 K14564 - gmx:100815506 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01139 07 10164121 10167376 Car07g01139 07 10164121 10167376 ECH