Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01117 ATGGAAATGAAGAAGCTCTTATTTGTTTCCTTATTCCTTGCTTTAATTTTCGGAGTAGCCAAGAGCTTTGATTTCCAAGAAAAAGATTTGGCATCGGATACAAATATTTGGGATTTATACGATAGATGGGGAAGTCACCACACAATTTCTCGAAGCCCTAACGAGAAGAACAAACGTTTCAACACTTTCAAATCCAATGCTATGCATGTCCTCAATACCAATAAATTAAATAAACCTTACAAACTTAAGTTGAATAAATTTGCAGACATGACTAATGATGAATTCAAGAGCTTATATGCTAATTCAAACATAGATTGTCATGGAAATATTCGTGCCTCACCACGTGGCAAAGACACTTTCATGTATGACAAAGTGAGCAATGTTCCTTCTTCCGTTGATTGGAGGAAGAATGGCGCTGTCACTAATGTAAAGAATCAAGGCCATTGCGGTAATTGTTGGGCGTTTTCAACTATTGTAGCTGTGGAAGGTATTAACCAAATAAAGACACAAAAACTAGTGTCCCTGTCTGAACAACAACTCGTGGATTGTGACATTGAAAAAAATCGAGGATGCAATGGTGGGTTAATGGAAAATGCATTCGAGTTCATTAAGCAAAATGGTATAACAACTGAAAGCAATTATCCTTATGTTGCAAAAGATGGAACTTGTGATGTAGCAAAGAAGAATAAGCCAGCAGTGTCAATTGATGGGTATGAAAATGTCCCTACGAATGATGAAGCTTCATTACTCAAAGCTGCTGCCAACCAACCTATATCTGTAGCTATTGATGCTGGAGGATCTGATTTTCAGTTATATTCAGAGGGAGTATTTAGTGGATATTGTGGCACTCGGCTAAATCATGGAGTGGCAATTGTGGGGTATGGAGAAACTGAAGATGGAACAAAATATTGGATAGTGAAGAATTCTTGGGGAAGCCAATGGGGAGAAGAAGGTTACATTAGAATTCAAAGGGACGTATCTCAAAAACAAGGTCTATGTGGTATAGCAATGGATGCTTCTTATCCAATCAAAAAATCATCTACCAACCCAACAGAACATTCATCTTCTAAAGATGAGCTTTAA 1083 0.3749 MEMKKLLFVSLFLALIFGVAKSFDFQEKDLASDTNIWDLYDRWGSHHTISRSPNEKNKRFNTFKSNAMHVLNTNKLNKPYKLKLNKFADMTNDEFKSLYANSNIDCHGNIRASPRGKDTFMYDKVSNVPSSVDWRKNGAVTNVKNQGHCGNCWAFSTIVAVEGINQIKTQKLVSLSEQQLVDCDIEKNRGCNGGLMENAFEFIKQNGITTESNYPYVAKDGTCDVAKKNKPAVSIDGYENVPTNDEASLLKAAANQPISVAIDAGGSDFQLYSEGVFSGYCGTRLNHGVAIVGYGETEDGTKYWIVKNSWGSQWGEEGYIRIQRDVSQKQGLCGIAMDASYPIKKSSTNPTEHSSSKDEL 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01117 360 Pfam Papain family cysteine protease 128 343 IPR000668 GO:0006508|GO:0008234
Car07g01117 360 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 20 350 - -
Car07g01117 360 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 303 322 IPR025661 -
Car07g01117 360 SMART Inhibitor_I29_2 40 95 IPR013201 -
Car07g01117 360 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 285 295 IPR025660 -
Car07g01117 360 SUPERFAMILY Cysteine proteinases 38 343 IPR038765 -
Car07g01117 360 SMART pept_c1 128 343 IPR000668 GO:0006508|GO:0008234
Car07g01117 360 Pfam Cathepsin propeptide inhibitor domain (I29) 40 95 IPR013201 -
Car07g01117 360 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 146 157 IPR000169 -
Car07g01117 360 CDD Peptidase_C1A 129 342 IPR039417 -
Car07g01117 360 Gene3D Cysteine proteinases 16 345 - -
Car07g01117 360 PRINTS Papain cysteine protease (C1) family signature 303 309 IPR000668 GO:0006508|GO:0008234
Car07g01117 360 PRINTS Papain cysteine protease (C1) family signature 146 161 IPR000668 GO:0006508|GO:0008234
Car07g01117 360 PRINTS Papain cysteine protease (C1) family signature 287 297 IPR000668 GO:0006508|GO:0008234
Car07g01117 360 PANTHER KDEL-TAILED CYSTEINE ENDOPEPTIDASE CEP1 20 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01117 Car-Chr7 9929392 9931199 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01117 K16292 - gmx:548011 541.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01117 07 9929392 9931199 Car05g01669 05 61537570 61539908 PCT