Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00990 ATGATGTCCCTTAAGATGAATGAAATGTGGACAACAATGGGGTCAACCTTAGCAAGCTTAATGTTCATTTGGGCTATCATAAGACAATACTGTCCATACCAAATCACACGTTTCTTTGAAAAAAACAGTCATAGAATCATGGACTATTTCTATCCTTACATTAGAATCTCGTTCCATGAATTCTTAGGTGACAGAATCAAAAGAAGTGATGCTTATGGTGCCGTTGAAGCTTATCTCAGTGCCAACACATCAAAGAGTGCAAAAAGACTCAAAGCTGAGATGGGAAAAGATAGCACCAACTTGGTTTTAACAATGGATGAATTCGAAAGAGTAACAGATGATTTTTGCGGCGTTAAAGTTTGGTGGGTTTGTAGCAAAGTTATGTCATCATCAACAAGGTCAATGATGATGATGCCTTATACAGAACAAGAGAGGAGATTCTACAAACTAACTTTTCACAAAAAGTATAGAGAAACAATAACAGAGATTCGGTTGAGGAATAGGCAGAGGAAGTTGTATACAAATAGTCCTGGTTATAAATGGCCTAGTTATAAACAAACTATGTGGAGTCACATTATGTTTGAACACCCTGCCACTTTCGATACAATGGCTATGGAGCCATTGAAAAAGAAGGAGATTATTGAAGATTTGGTTACTTTTAGTAAAAGTAAGGATTTTTATGGTAGGATAGGGAAAGCTTGGAAAAGGGGTTATTTACTTTTTGGCCCTCCAGGTACTGGTCAAAGGAAGAAAAAGGGTGATTGTGGTAAGTTTTTGTCTGATGATGAGAATGAAAAAGTGAATTTTGATGTTggaaggaaagaggtgaaggaagaaggaagTGTTGGTGTTGGTGGTGTTAATAGCAAAGTGACACTTTCAGGGTTGTTGAATTTTATAGATGGTATATGGTCAGCTTGTGGAGGTGAGAGGTTGATTGTTTTCACAACTAATTATGTGGAGAAGCTGGATCCTGCACTTATTAGAAGGGGTAGAATGGACAAACATATTGAACTTTCTTATTGTAGTTTTAATGGTTTTAAAGTGCTTGCTAATAATTACTTGAGAGTTGAGAAACATTTGTTGTTTGAGACTATTGAGAGGCTAATTGGTGAAGTCAAGATTACACCAGCTGATGTAGCTGAGAGTCTTATGCCTAAGTCTCCAATGGATGATGCTGATAAGTGTCTTTTGAATTTGATTCAAGCACTTGAGGAAGCAAAAACTGAGAGACAGAATAGTACAAGTTCAATTAAGGAACAAGATGAGGAAGTGGAACACATTATTACTCCTATTAAAGAAAATGGTAATGGTAACTTTATTGATGAGAAAGAAAGTGATGAAGCAATTAAGCAAATTGAGAGATAG 1368 0.3538 MMSLKMNEMWTTMGSTLASLMFIWAIIRQYCPYQITRFFEKNSHRIMDYFYPYIRISFHEFLGDRIKRSDAYGAVEAYLSANTSKSAKRLKAEMGKDSTNLVLTMDEFERVTDDFCGVKVWWVCSKVMSSSTRSMMMMPYTEQERRFYKLTFHKKYRETITEIRLRNRQRKLYTNSPGYKWPSYKQTMWSHIMFEHPATFDTMAMEPLKKKEIIEDLVTFSKSKDFYGRIGKAWKRGYLLFGPPGTGQRKKKGDCGKFLSDDENEKVNFDVGRKEVKEEGSVGVGGVNSKVTLSGLLNFIDGIWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCSFNGFKVLANNYLRVEKHLLFETIERLIGEVKITPADVAESLMPKSPMDDADKCLLNLIQALEEAKTERQNSTSSIKEQDEEVEHIITPIKENGNGNFIDEKESDEAIKQIER 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00990 455 ProSitePatterns AAA-protein family signature. 311 330 IPR003960 GO:0005524|GO:0016887
Car07g00990 455 Gene3D - 190 249 IPR027417 -
Car07g00990 455 MobiDBLite consensus disorder prediction 412 430 - -
Car07g00990 455 Pfam Domain associated at C-terminal with AAA 32 124 IPR025753 -
Car07g00990 455 Gene3D - 262 336 IPR027417 -
Car07g00990 455 CDD AAA 235 341 - -
Car07g00990 455 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 196 358 IPR027417 -
Car07g00990 455 MobiDBLite consensus disorder prediction 409 455 - -
Car07g00990 455 MobiDBLite consensus disorder prediction 438 455 - -
Car07g00990 455 PANTHER BCS1 AAA-TYPE ATPASE 7 248 - -
Car07g00990 455 PANTHER BCS1 AAA-TYPE ATPASE 246 424 - -
Car07g00990 455 Pfam ATPase family associated with various cellular activities (AAA) 289 340 IPR003959 GO:0005524|GO:0016887
Car07g00990 455 Coils Coil 404 424 - -
Car07g00990 455 Gene3D - 337 409 - -
Car07g00990 455 PANTHER ATP BINDING PROTEIN 7 248 - -
Car07g00990 455 PANTHER ATP BINDING PROTEIN 246 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00990 Car-Chr7 8756919 8758614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00990 211 356 Miscellaneous Gene Families AT5G53170 27.011 3.63e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00990 - - lang:109362861 623.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00990 07 8756919 8758614 Car07g00990 07 8756919 8758614 ECH