LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Car07g00989	ATGTCTCACGGATCTCCCTCTTCTCTCCCTGCCCACCGATCATCACCTTCGCCGGACCCCGATTCCGATATTCCCGCTCCGCTTCCCAAGGAGGAAACAACCGCACCCGCTCCTCTTCCGACCACGAGAAGCAACCGTCCCTCACGCGCGTGCACGATTCGTGCCGCTTCTCGTCTATATTCCTCGCAACCGGTAATCGAAAGGAAACCTAAGAAGGAGCAGCAGCGGAGGGAGGAGTCTCCTCCGTCGCAATGCAGTAAGATCGTGACGCCGTTGGTGGAACCTCCGTCGGAGTCGCAGTTGCCGCGGTGGAAACTTCGGTCGATGTGGGAGTTAGCTTCCGTACTCAATTTCTTGCGTCTATTTAGGCCTCTGTTGAATATTTCTCTTGAATTCTCTGCCGAAGAGTTTGAGACTGCTCTTCTTACCCCCAATGACACTTTGTTTTACATTCATATGCCTTTGTTAAAGGCAATCCCTCCTATTACACGAATGGCACTCACACGTGATACTTGGATAACTGTATTATGCAGAAAATTAAGAGATTGGTGGCATTGGGTTGCTGAGGGGGATCTTCCAATTGTTGCTTCACATGGGGCGGAGATTGAAGTATATAAATCACTTGATCCAGCCATCCGTGTTATCATCTTAAAAGCATTATGTGACATTCGTGTTGAGCAAGAAGATATCCGAAATTATATTGACAACTCAATCAAACACAGTATTCCACTTTCAACATTCCGTAAAGAGCGTATTGGAGGTGATTCACATGGAATTTCTTATTGGTATGAAGATGACCCCGATATTGGTCATAGGTTGTATCGAGAAATAAGGAAAACTGAAGTGGTTCAAACGAAGAAAGGGAAAGCAAGGGGTTCCCAGGTTCTTTCTAATACGTCATACCAGTGGGAGGCAGTTGCTACCAATTTTGATGAATTTCAAGATGTTTCTGAGAAGCTTTTCTCAAGTAAAAACAGAACAGAGGCTTCTGTGGGGAAAAAGCTGAAGATAGACATGCTTCCTGAAATTGAGAAAGTTCACAAGAAAAAGGAGAGGTTGCTGAAAAAGCAACACAGAGAAGCTCTTCTTCTTGATAATTACTTGGTTGTTGACGGCCTTGGTTCTGGGCGTTCACTTCGTGACAGGAAACCTGTAACCTACACTTTCGATGATTATGATCGGTCCATCAATGAGGCAATTAAAGTGACCAAGCGGAAACAGCCATCCCCAGAACCTATGCCCAGGAGAGAACCAGTAGCAAAACCTGAAGCTTTGACTAATGGTAACCATGGTCCTTCACATGCTGAACAAAATCAGAATTTTGCTATATCATCTCCAGAATCATTTGACTCtgatgatgatgatgaatatgataatACCGACACTTTGGACCGAAGTGGTCGTCGAAGAAGGAAACCTAAGCGGTATTCAGAGAATGAGTTTGTTGAAGAAGTGTCTGATTATGAGGCAGACTTTGACAGTGATGATGATATTGTTGGAGAAGCTGTATATGATGAAGAATATCTCAAGAAACGCAAGCAGAGAAGGAAGCATTCTAGTAGCTCTgaaggagatgaagaatatcagggcgatgatgataatgtagaagatgaagaagaagaagaagaagacgatgatgatgaagaTTCTATAAGCATGAGTGAGGATAGTGACAAACCCCGCAAAGTCAAACGATTGCCAGGCCGAACTAGGAGGCAAACGAAACTCAGGTCTGTGGGTGAGATGCAATCAAGTCCAAGACGCAGTAAGAGGGCAACTAGAAATCGTATAGATTACCGACAATATGAGATGTCGGATTCAGAAACTGAGTTTATCAAACCCAAGAAGTCTAACGCATCGGCTGATCACTCGGATCCCGGTGAGAATGAGAATGGGgaatatatgatggaaagtgaagattcagatagcaatgaagatgaagatCAGGAAATGAAAGTTGATGAGCCTGTTAGTGTTCCTTCCCATGCAGTAGAAGAGAATGAACAAAACCAGCCTCCTGAAAAGTCAAGTAGTCCACCTGGTCACGAAGAAGTTGAGGGCACAGGAAAAAGACGTTTTCTTGATTTGAATGAGCTTGCCCCTAGCCCTGGTTTTGATGATGGTCCAAGTACAATAATGAAAGATGAAGACAATGACTACTGA	2163	0.417	MSHGSPSSLPAHRSSPSPDPDSDIPAPLPKEETTAPAPLPTTRSNRPSRACTIRAASRLYSSQPVIERKPKKEQQRREESPPSQCSKIVTPLVEPPSESQLPRWKLRSMWELASVLNFLRLFRPLLNISLEFSAEEFETALLTPNDTLFYIHMPLLKAIPPITRMALTRDTWITVLCRKLRDWWHWVAEGDLPIVASHGAEIEVYKSLDPAIRVIILKALCDIRVEQEDIRNYIDNSIKHSIPLSTFRKERIGGDSHGISYWYEDDPDIGHRLYREIRKTEVVQTKKGKARGSQVLSNTSYQWEAVATNFDEFQDVSEKLFSSKNRTEASVGKKLKIDMLPEIEKVHKKKERLLKKQHREALLLDNYLVVDGLGSGRSLRDRKPVTYTFDDYDRSINEAIKVTKRKQPSPEPMPRREPVAKPEALTNGNHGPSHAEQNQNFAISSPESFDSDDDDEYDNTDTLDRSGRRRRKPKRYSENEFVEEVSDYEADFDSDDDIVGEAVYDEEYLKKRKQRRKHSSSSEGDEEYQGDDDNVEDEEEEEEDDDDEDSISMSEDSDKPRKVKRLPGRTRRQTKLRSVGEMQSSPRRSKRATRNRIDYRQYEMSDSETEFIKPKKSNASADHSDPGENENGEYMMESEDSDSNEDEDQEMKVDEPVSVPSHAVEENEQNQPPEKSSSPPGHEEVEGTGKRRFLDLNELAPSPGFDDGPSTIMKDEDNDY	720

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Car07g00989	720	Pfam	WSTF, HB1, Itc1p, MBD9 motif 1	205	235	IPR028942	-
	Car07g00989	720	MobiDBLite	consensus disorder prediction	587	630	-	-
	Car07g00989	720	MobiDBLite	consensus disorder prediction	1	15	-	-
	Car07g00989	720	MobiDBLite	consensus disorder prediction	399	418	-	-
	Car07g00989	720	MobiDBLite	consensus disorder prediction	399	478	-	-
	Car07g00989	720	MobiDBLite	consensus disorder prediction	65	80	-	-
	Car07g00989	720	MobiDBLite	consensus disorder prediction	503	525	-	-
	Car07g00989	720	MobiDBLite	consensus disorder prediction	1	97	-	-
	Car07g00989	720	MobiDBLite	consensus disorder prediction	37	59	-	-
	Car07g00989	720	MobiDBLite	consensus disorder prediction	503	720	-	-
	Car07g00989	720	MobiDBLite	consensus disorder prediction	526	553	-	-
	Car07g00989	720	MobiDBLite	consensus disorder prediction	632	652	-	-
	Car07g00989	720	MobiDBLite	consensus disorder prediction	430	447	-	-
	Car07g00989	720	PANTHER	REMODELING AND SPACING FACTOR 1	31	719	IPR028938	GO:0006355\|GO:0031213
	Car07g00989	720	MobiDBLite	consensus disorder prediction	679	693	-	-
	Car07g00989	720	MobiDBLite	consensus disorder prediction	663	677	-	-
	Car07g00989	720	MobiDBLite	consensus disorder prediction	461	478	-	-
	Car07g00989	720	PANTHER	DDT DOMAIN-CONTAINING PROTEIN DDR4	31	719	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Car07g00989	Car-Chr7	8747970	8755798	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Car07g00989	-		-	gmx:100795519	1028.08

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Car07g00989	07	8747970	8755798	Car07g00989	07	8747970	8755798	ECH