Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00952 ATGGTTGGAGACAGAACAAAGAAGTTGAAAGTtgctgagaattcagaagatgttgacggagaactcgttgtcaccgTCGAGAAGTTGCAAGAGATCCAAGACGAACTCGAAAAGATCAACGATGAAGCAAGTGATAAGGTTCTCGAAATTGAGCAGAAGTACAATGAGATAAGGAAGCCAGTTTATGATAAGCGAAATGAGATCATCAAATCTATTCCTGACTTCTGGTTGAATGCTTTTTTGAGTCATCCTACTCTTGGTGAACTTTTGAACGAGGAAGATCAAAAGATATTTAAGTATTTGAGTTCTCTTGAGGTTGAAGATAACAAAGATGTCAAATCTGGATATACAATCACCCTTAATTTCAATCCCAATCCCTATTTTGAGGATTCAAAACTTTCAAAGACTTTTACTTTCCTTGAGGAAGGAACAACAAAGATCACTGCTACCCCCATAAGATGGAAAGAGGGCAAGGGAATACCCAATGGTGTCAATCATGAGAAGAAAGGGAACAAACGGGCTCCTACTGATGTCAGTTTCCTTAGTTGGTTTTGTGACTGTGAGCAGAAAGATGATATGGAAGATATTCATTATGAGGTTGCAGAATTAATCAAGGATGATTTATGGTCCAATCCACTCATTTATTTCAACAATGAGGAGCCtgatgaagaggatgctgatgatgaagctgatgatgaGgaaaaagacgaggatgactctgatgatgatgaccaagaggatgatgagggtgaagatgaggaaggaaactga 771 0.3048 MVGDRTKKLKVAENSEDVDGELVVTVEKLQEIQDELEKINDEASDKVLEIEQKYNEIRKPVYDKRNEIIKSIPDFWLNAFLSHPTLGELLNEEDQKIFKYLSSLEVEDNKDVKSGYTITLNFNPNPYFEDSKLSKTFTFLEEGTTKITATPIRWKEGKGIPNGVNHEKKGNKRAPTDVSFLSWFCDCEQKDDMEDIHYEVAELIKDDLWSNPLIYFNNEEPDEEDADDEADDEEKDEDDSDDDDQEDDEGEDEEGN 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00952 256 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 2 249 - -
Car07g00952 256 Pfam Nucleosome assembly protein (NAP) 70 218 IPR002164 GO:0005634|GO:0006334
Car07g00952 256 Pfam Nucleosome assembly protein (NAP) 26 70 IPR002164 GO:0005634|GO:0006334
Car07g00952 256 Gene3D Nucleosome assembly protein 73 220 - -
Car07g00952 256 SUPERFAMILY NAP-like 15 217 IPR037231 -
Car07g00952 256 Coils Coil 22 53 - -
Car07g00952 256 Gene3D - 2 72 - -
Car07g00952 256 MobiDBLite consensus disorder prediction 218 256 - -
Car07g00952 256 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 2 249 IPR002164 GO:0005634|GO:0006334
Car07g00952 256 MobiDBLite consensus disorder prediction 215 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00952 Car-Chr7 8384060 8389362 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00952 K11290 - gmx:100808081 380.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00952 07 8384060 8389362 Car05g00744 05 42194882 42198900 ECH
Car07g00952 07 8384060 8389362 Car07g00952 07 8384060 8389362 ECH