Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00940 ATGACCTCCTTCGCCCTCAAATCCTTCACCGGACTCCGCCATTCCTCACCGGAAACCCCTCATTTCTCCTTCCGACCAAAACCCATCACACTCCGCCGGAAGTTCAACGTCATCGCCGGAATTTCCAGTCCCAAAATCGATGGCCGGAACCTCCGTGTAGCAGTCATTGGCGGAGGTCCGGCAGGCGGCGCAGCCGCCGAGACACTAGCAAAAGGCGGCATCGAAACCTTCCTCATCGAACGGAAAATGGACAACTGCAAACCATGCGGCGGAGCCATTCCTCTATGTATGGTAGGTGAATTCGACCTACCACTGGACATCATCGACCGCCGTGTGACAAAGATGAAAATGATTTCGCCGTCGAATGTAGCCGTGGACATTGGGCGGACACTTAAGCCTCACGAGTACATTGGGATGGTCCGGCGTGAGGTGTTAGATGCTTATCTTAGAGAGCGGGCGAAGGAAAACGGGGCGAATATCATAAACGGGTTGTTTTTGAAAATGGATATTCCTAAAGAGAAGAACGCGCCTTATGTACTTCATTACTCTTCGTATGATGGTAAAACTGGTGGTGTTGGTGAAAAATGTAGAATGGAAGTTGATGCTGTTATTGGAGCTGATGGAGCTAATTCTAGGGTTGCTAAGTCTATTGATGCTGGTGATTATGAATATGCTATTGCTTTTCAGGAGAGGATAAAAATTCCAGATGATAAAATGGTATATTACGAGGATCTCGCGGAAATGTATGTGGGGGATGACGTTTCACCAGATTTCTACGGATGGGTATTTCCGAAATGCGACCACGTTGCTGTTGGCACTGGCACCGTGACACACAAAGGAGACATCAAGAAGTTCCAACTAGCAACAAGGAAAAGAGCCGAGGACAAGATCTTAGGAGGGAAGATCATCCGTGTGGAGGCTCACCCTATACCAGAACATCCAAGGCCACGAAGATTGTCGGGAAGGGTCGCACTCGTGGGGGATGCTGCTGGCTATGTGACCAAATGTTCCGGCGAAGGAATCTATTTTGCAGCCAAGAGTGGACGGATGTGCGCAGAGGCAATCGTGCAGGGTTCGCAGAACGGGAAGAGGATGGTTGAAGAAGGGGATTTGAGAAAGTATTTGGAGAAATGGGACAAGACTTATTGGCCTACTTACAAGGTTTTGGACATTCTTCAAAAAGTGTTTTATCGGTCGAATCCTGCTAGGGAAGCGTTTGTGGAGATGTGTGCTGATGAATATGTGCAGAAGATGACATTTGATAGCTATTTGTACAAAACTGTTGTACCTGGAAATCCATTGGAGGATATCAAGTTGGCTATCAACACCATTGGGAGCTTGGTTAGGGCTAATGCTCTAAGGAGGGAGATGGACAAACTTAATACTGACATTGGCTTTAGTTTGGTGGGTGGGTATATTTATGCAGCGTTTGGCTTTCATCCTCGACCCGTAGGCGGATATTTCAAACCCATTTTTCTTCTTATTAAAtctctctctctctctctctctctctctctctctctcAACTTCTCCTTCCAATTCACATTACCATTCCCAGAGGTTGAGATGGCAGCAGCAGCTACTTTTACTATTGGCACCACCCACACAGGGAGGTCACTTCCTCAATCAAACCCTTTTTGTTTGAAGTTCAATTCCCAGGTTCAGTTTAAGAACTTCTCTGGCCTCAAAGCCATGTCATCTCTTAGATGTGAGTCTGAATCATCTTTCTCTGGCAATGAAACTTGTGCTGCTCTGCGTGCAACTTTTGCACCCAAAGCTCAAAAGGAAAACCGAAACCTCAACAGCAACTTGCAGCCTCAGGCATCCTACAAAGTAGCTGTTCTGGGGGCTGCAGGAGGGATAGGTCAACCGCTGTCACTTCTCATCAAGATGTCGCCTTTGGTTTCCGACCTGCATCTATACGATATTGCGAATGTTAAGGGAGTTGCTGCTGATATCAGTCATTGCAACACTCCCTCAAAAGTTTTGGATTTCACAGGAGCTTCTGAGTTAGCAAATTGTTTGAAAGGTGTGGATGTTGTTGTTATACCTGCTGGTGTTCCTAGGAAGCCTGGAATGACTCGCGATGACCTTTTCAACATCAATGCCGGTATAGTTAGGGACTTGGTCTCAGCTGTTGCTGATAATTGTCCTGGTGCTTTTATTCATATTATCAGTAACCCTGTGAACTCTACTGTTCCTATTGCTGCTGAAATTTTGAAACAAAAGGGTGTCTATGATCCTAAAAAGCTCTTTGGTGTTACTACACTTGATGTTGTGAGGGCTAACACGTTTGTTTCTCAGAGGAAGAACCTGAGGCTGATTGATGTAGATGTTCCGGTTGTTGGGGGCCATGCCGGGATTACCATTCTTCCTATCTTGTCAAAGACAAGACCTTCAGTGAGTTTCACTGATGAAGAAATTGATGAGCTAACAGTTAGGATTCAAAATGCTGGAACTGAAGTTGTTGAGGCAAAGGCTGGTGCAGGGTCTGCTACTTTGTCAATGGCTTATGCAGCTGCTAGATTTGTTGAATCGTCTCTTCGTGCTCTTGATGGAGACGCTGATGTGTATGAATGCTCATTTGTACAGTCGGACCTGACCGACCTTCCGTTTTTCGCTTCAAGGGTGAAGATTGGTAGGAAAGGAGTTGAGGCTTTAATCCCAACCGATCTCCAAGGGTTAAGTGAGTATGAGCAGAAGGCTTTGGAAGCACTTAAGCCAGAACTTAAGGCCAGCATTGAGAAGGGGATTGCCTTTGCTAATAAGCAAACTGTTGCTGCTTAA 2787 0.4557 MTSFALKSFTGLRHSSPETPHFSFRPKPITLRRKFNVIAGISSPKIDGRNLRVAVIGGGPAGGAAAETLAKGGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKMISPSNVAVDIGRTLKPHEYIGMVRREVLDAYLRERAKENGANIINGLFLKMDIPKEKNAPYVLHYSSYDGKTGGVGEKCRMEVDAVIGADGANSRVAKSIDAGDYEYAIAFQERIKIPDDKMVYYEDLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRKRAEDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVQGSQNGKRMVEEGDLRKYLEKWDKTYWPTYKVLDILQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKTVVPGNPLEDIKLAINTIGSLVRANALRREMDKLNTDIGFSLVGGYIYAAFGFHPRPVGGYFKPIFLLIKSLSLSLSLSLSLNFSFQFTLPFPEVEMAAAATFTIGTTHTGRSLPQSNPFCLKFNSQVQFKNFSGLKAMSSLRCESESSFSGNETCAALRATFAPKAQKENRNLNSNLQPQASYKVAVLGAAGGIGQPLSLLIKMSPLVSDLHLYDIANVKGVAADISHCNTPSKVLDFTGASELANCLKGVDVVVIPAGVPRKPGMTRDDLFNINAGIVRDLVSAVADNCPGAFIHIISNPVNSTVPIAAEILKQKGVYDPKKLFGVTTLDVVRANTFVSQRKNLRLIDVDVPVVGGHAGITILPILSKTRPSVSFTDEEIDELTVRIQNAGTEVVEAKAGAGSATLSMAYAAARFVESSLRALDGDADVYECSFVQSDLTDLPFFASRVKIGRKGVEALIPTDLQGLSEYEQKALEALKPELKASIEKGIAFANKQTVAA 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00940 928 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 606 754 IPR036291 -
Car07g00940 928 Gene3D - 51 464 IPR036188 -
Car07g00940 928 PANTHER MALATE DEHYDROGENASE, GLYOXYSOMAL 543 928 - -
Car07g00940 928 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 199 214 - -
Car07g00940 928 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 52 74 - -
Car07g00940 928 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 320 335 - -
Car07g00940 928 Gene3D - 755 926 IPR015955 GO:0003824|GO:0016616
Car07g00940 928 Pfam Glucose inhibited division protein A 53 87 IPR040131 -
Car07g00940 928 Gene3D - 608 754 - -
Car07g00940 928 TIGRFAM MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 611 922 IPR010097 GO:0006099|GO:0030060
Car07g00940 928 TIGRFAM GG-red-SF: geranylgeranyl reductase family 53 355 IPR011777 GO:0016628
Car07g00940 928 MobiDBLite consensus disorder prediction 1 23 - -
Car07g00940 928 PANTHER MALATE AND LACTATE DEHYDROGENASE 543 928 - -
Car07g00940 928 TIGRFAM BchP-ChlP: geranylgeranyl reductase 52 449 IPR010253 GO:0015979|GO:0015995|GO:0045550
Car07g00940 928 TIGRFAM ChlP: geranylgeranyl reductase 51 449 IPR011774 GO:0045550
Car07g00940 928 ProSitePatterns Malate dehydrogenase active site signature. 754 766 IPR001252 GO:0006108|GO:0016615
Car07g00940 928 SUPERFAMILY FAD/NAD(P)-binding domain 51 433 IPR036188 -
Car07g00940 928 SUPERFAMILY LDH C-terminal domain-like 754 922 IPR015955 GO:0003824|GO:0016616
Car07g00940 928 Pfam lactate/malate dehydrogenase, NAD binding domain 611 753 IPR001236 GO:0016491
Car07g00940 928 MobiDBLite consensus disorder prediction 1 17 - -
Car07g00940 928 CDD MDH_glyoxysomal_mitochondrial 610 921 IPR010097 GO:0006099|GO:0030060
Car07g00940 928 Pfam lactate/malate dehydrogenase, alpha/beta C-terminal domain 755 920 IPR022383 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00940 Car-Chr7 8303714 8312314 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00940 K10960 - gmx:100779933 851.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00940 07 8303714 8312314 Car07g00940 07 8303714 8312314 ECH