Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00930 ATGGGTCCCCCTCCTCTCAGTGATGATCGATCGGAAATTGTGTTCTTCGACGTAGAAACAACCGTTCCTACGCGAACTGGCCAGGGTTTTGCAATTTTGGAATTCGGAGCCATTCTTGTTTGTCCAAGGAAGCTGACGGAGCTTCGAAACTACTCCACTCTGGTTCGACCTGCCAACCTTTCACTCATCTCTCCGTTATCGGAGCGCTGTAACGGAATTAACGCCGCAGCCGTTTCCACCGCCCCTACTTTCGCCGACATTGCTAACACCGTCTATGATCTTCTTCATGGGAGGATTTGGGCGGGTCATAATATCATAAGGTTTGATTGTGTTCGGATTAGAGATGCATTTGCTGCTGTTAATCAGACGCCGCCTGAGCCTAAGGGCATAATTGACTCTTTGGTTTTGTTGACTCAAAAGTTTGGAAAAAGAGCTGGTAACATGAAGATGGCTACTCTTGCTACCTATTTTGGTCTTGGGCAGCAGACGCACAGGAGCTTAGATGATGTTCGGATGAATCTTGAAGTCCTCAAATACTGTGCCACAGTTCTATTCTTGGAGTCAAGTCTTCCAGATATATTCACTGAAAATTGTTGGGTTTCACCAAATGCTGTTACAAGAAGCCGTAGTAAGGATTCTGCGTCAGTAACATCTCCTCAAACTAAAGATCAAAATCATCCAATCTTTTCTCTTACAACAAGCAACACAAAAGTGGCTGTTCCACGTTTTGCAAATTCCAGTACAGTTCAATCAGATACTTTCAGCTTTCGCGATCTTCAAGATGAAATTAACCGAGAATCCATTAGGACAGATGTTGCCATGAATGAAAAAGCTATGCAACATTCACCTGCTTCATCAGCCTCATCTTCTGTGCCTCAGTCTTGCAGCAGCTCTATTGCTGTTTTAGAGCCCGGAAAAATAAGTATTTCTTCTATTGATGGGTCTGTTGTTCCATCTTATCGTGGCATTCAAAGGATAGAGTTACTTCATGAAGGTTTTCCATTTCAGCTTCAGTGTTCTGGTTTGAAAGTGCGGTTTGGAATAACCACAAAGTTTGCTGATAGTGCTGGCCGACCACGGTTAAACATTGTGGTCGATCCGTCAGAAAGTTTATGTAATGTTCTTGATGCATGCGACAATGTTGCGCGTAAGTTATCCTCAGAGTCTGGTAGCAGCTCTGATTGGAGGTCAGTTGTTATTAGGAAAGAGGGCTTCTTCAACTATCCTACTATCAGATTGCATATACCTACAGCAGTATGCGAAGAGATTGCGATTTATGCGACAGAAATATATCAAAGAGAATCATCTGGATCTGTGCAAAGACTTCTCTTCAGTAAGTTTGATGCTGAAGAACTTGGTTCCTTGTTCAAGCCCGGGACATTTGTTGATGCATTGTTCTCCTTAGATCCGTATGACTATCATCAGAATGCAGGAATTAAATTAGTTGCCAAAAAATTGATCATTCATTGCAAGTAG 1476 0.4282 MGPPPLSDDRSEIVFFDVETTVPTRTGQGFAILEFGAILVCPRKLTELRNYSTLVRPANLSLISPLSERCNGINAAAVSTAPTFADIANTVYDLLHGRIWAGHNIIRFDCVRIRDAFAAVNQTPPEPKGIIDSLVLLTQKFGKRAGNMKMATLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESSLPDIFTENCWVSPNAVTRSRSKDSASVTSPQTKDQNHPIFSLTTSNTKVAVPRFANSSTVQSDTFSFRDLQDEINRESIRTDVAMNEKAMQHSPASSASSSVPQSCSSSIAVLEPGKISISSIDGSVVPSYRGIQRIELLHEGFPFQLQCSGLKVRFGITTKFADSAGRPRLNIVVDPSESLCNVLDACDNVARKLSSESGSSSDWRSVVIRKEGFFNYPTIRLHIPTAVCEEIAIYATEIYQRESSGSVQRLLFSKFDAEELGSLFKPGTFVDALFSLDPYDYHQNAGIKLVAKKLIIHCK 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00930 491 PANTHER DNA POLYMERASE III SUBUNIT EPSILON 6 490 - -
Car07g00930 491 Pfam Exonuclease 14 177 IPR013520 -
Car07g00930 491 Gene3D - 6 183 IPR036397 GO:0003676
Car07g00930 491 PANTHER PROTEIN NEN3 6 490 - -
Car07g00930 491 SMART exoiiiendus 12 186 IPR013520 -
Car07g00930 491 CDD DEDDh 14 178 - -
Car07g00930 491 MobiDBLite consensus disorder prediction 209 228 - -
Car07g00930 491 SUPERFAMILY Ribonuclease H-like 11 182 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00930 Car-Chr7 8221907 8224776 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00930 - - ccaj:109808157 732.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00930 07 8221907 8224776 Car07g00930 07 8221907 8224776 ECH