Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00893 ATGGAGTCTGACAGCGACGAGAGTAGACGAAGCAAAAACAACGTTCAACGACACGTAGCTTTACTCTATGACGAGAGGATGTGTAAACACTTCAATCCAGAAGACGTTAACCATCCTGAAACTCCAAATCGCATTAGGGCTATTTGGAACAAGCTTCAAACCTCTGGCATTACCGATCGATGTGTGATTTTGGATGCTAAAGAAGCCGAAGACAAATATTTAGAATCAGTTCATTCTAAAAATCATGTGAAACTGATTAAGAACATCAGCTCAAAAAATTTGAATTCGCAGAAGCGTAGTGCGTCTAAACTTAATTCTATATACTTCAATGAAGGTTCAACAGAATCTGCCTATCTTGCTGCCGGCTCCACTATAGAGGTTGCTAAAAGAGTAGCAAGCAAGGAATTCCGTTCTGCTGCTGCTATTGTTAGGCCTCCAGGTCACCATGCAGAGCAAAATGAAGCCATGGGATTTTGTCTGTTCAACAATGTGGCAATTGCTGCATCTTATCTCTTAGATGAAAGTCCAGCATTCGGTGTAAAGAAAATTTTAATTGTTGACTGGGACGTCCATCATGGAAATGGTACTCAAAAGATGTTTTGGAATGATTCTCGAGTGTTATTCTTCTCCGTTCACAGGCATGAATTTGGGAGTTTTTATCCGTCTAGTGATGATGGCTTCTATAACATGATTGGAGAAGGAGCAGGTGCTGGATACAATATAAATGTTCCATGGGAGAATGGTAGATGCGGTGATGCAGACTATTTTGCAGTGTGGGACCACGTCTTGCTCCCTGTTGCCAAAGAATTTAAACCAGACATAATAATAGTTTCTGCTGGATTTGATGCAGCTGTTGGAGACCCTTTGGGTGGATGCCGTGTCACACCATTTGGTTATTCTGTTCTGTTGAAGAAGTTGATGAATTTTGCCGAAGGTAGGATTGTACTGGTTTTAGAAGGAGGGTATAATCTTGACTCGATTGCAAAGTCAATGCATGCTTGTTTAGAGGTTTTGCTTGAAGACAAACCTCTTATTGAATCTTCTTCAGAAGCCTATCCATTTGAGTCTACATGGCGTGTGATCCAAGCGGTTCGCCAGGAATTAAGTCCCTTTTGGCCTACGCTTGCGTGTGAATTACCACAATCAATAATTGGTCAAGTGGCACCACCTCCGCATACTCTTTTCTCAAGCTCTGACTCTGAGACTGAGGATGAAAAAGCTCCACTCAAATTTAAAAATATTGCAGAGCTTCTTGAAGATGTAATCAAACCATTTTCCACGCTCAAAGTTGATGCAGATGGAGAGACTGATGCTTCTTGGCGATCCGAATCGTCAAATGTTTACTTATGGTATGCTTCCTATGGCTCAAATATGTGGAGACCAAGATTTGATTGCTACATAGCAGGTGGACAGGTGGAAGGTATGCAGAAGCCGTGCTCTGGTTCAGTGAACAGTACTCTTCCGGAGGAGATCCTTTGGAAGACTTTCCCTTGTCATATATTTTTCGGTCGTGAATCCTCATGTTCATGGGGTCCTGGAGGTGTTGCGTTTCTTAATCCTGTACAAAACTCTCAGCACAAGACCTACATGTGCCTGTACAAAATATCGTTAGAGCAATTCAACGATATTTTATTCCAGGAAAATGGTTTAAGCCTTACCGCAGGCTCTTCTTTGTTTGATATTACTACTCTGAACGCCATCTCTACCAAGGAGTTCAGTACTCAAGAGGTTGTCAAGGATGGTTGGTATGGTAATGTTGTCTACTTAGGAAAGGAGCAGGACATTCCTATAATTACTATGACGTGTTCGCATCTTGATATCGAGCACTTCAAATGTGGGAAGCTACCGGTGTGTGCGCCTAATAAATCATATGCAAATACCTTAATAAAAGGGTTGGTAGAGGGAGAACAGCTCTCAAAGGCGGAGGCCATTGCTCACATAGAAGCTGCTGCTAAATCCTTCGATTTGCCTTGTATTTATTCTTAA 1986 0.4189 MESDSDESRRSKNNVQRHVALLYDERMCKHFNPEDVNHPETPNRIRAIWNKLQTSGITDRCVILDAKEAEDKYLESVHSKNHVKLIKNISSKNLNSQKRSASKLNSIYFNEGSTESAYLAAGSTIEVAKRVASKEFRSAAAIVRPPGHHAEQNEAMGFCLFNNVAIAASYLLDESPAFGVKKILIVDWDVHHGNGTQKMFWNDSRVLFFSVHRHEFGSFYPSSDDGFYNMIGEGAGAGYNINVPWENGRCGDADYFAVWDHVLLPVAKEFKPDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLKKLMNFAEGRIVLVLEGGYNLDSIAKSMHACLEVLLEDKPLIESSSEAYPFESTWRVIQAVRQELSPFWPTLACELPQSIIGQVAPPPHTLFSSSDSETEDEKAPLKFKNIAELLEDVIKPFSTLKVDADGETDASWRSESSNVYLWYASYGSNMWRPRFDCYIAGGQVEGMQKPCSGSVNSTLPEEILWKTFPCHIFFGRESSCSWGPGGVAFLNPVQNSQHKTYMCLYKISLEQFNDILFQENGLSLTAGSSLFDITTLNAISTKEFSTQEVVKDGWYGNVVYLGKEQDIPIITMTCSHLDIEHFKCGKLPVCAPNKSYANTLIKGLVEGEQLSKAEAIAHIEAAAKSFDLPCIYS 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00893 661 PANTHER HISTONE DEACETYLASE 10 608 - -
Car07g00893 661 PANTHER BNAA09G05590D PROTEIN 10 608 - -
Car07g00893 661 Gene3D Histone deacetylase domain 11 385 IPR037138 -
Car07g00893 661 Pfam Histone deacetylase domain 38 337 IPR023801 -
Car07g00893 661 SUPERFAMILY Arginase/deacetylase 17 374 IPR023696 -
Car07g00893 661 PRINTS Histone deacetylase superfamily signature 145 168 IPR000286 -
Car07g00893 661 PRINTS Histone deacetylase superfamily signature 272 282 IPR000286 -
Car07g00893 661 Gene3D - 435 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00893 Car-Chr7 7933579 7942814 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00893 K11406 - gmx:100788831 1084.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00893 07 7933579 7942814 Car07g00893 07 7933579 7942814 ECH