Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00877 ATGAGGTGGGAAAAGGTTGAGGTGAAGGCGATAGCAAAAGAGGGTGAAGGAGAATCTGGGCCAGGGAAAAGGTGGGGTCACACCTGTAACTCCATTAATGGTGGCAAATTTATCTATGTCTTTGGTGGTTATGGCAAAGATAATTGTCAAACCAATCAAGTTCATGTTTTTGATACTGTGAACCAAACTTGGAGCCAACCTGAAATAAAAGGATCCCCACCTACTCCTAGGGACAGTCACACTTGCAGTGTCATTGATGAAAAACTCTATGTGTTTGGGGGTACTGATGGGATGAATCCACTCAAGGACTTGCACATATTAGACACTTCTTTGCAAACATGGGAATCTCCAATTATAAGAGGAGAAGGGCCAGAGGCTCGAGAGGGTCACAGCGCAGCGGTTGTTGGCAAACGGCTCTTTATCTTTGGTGGTTGTGGAAAATCTGCTGATAATAACAATGAAGTCTACTACAATGATCTTTACATACTGAATACAGAAACGCTTGTTTGGATGCGCGCTACGACATCAGGCACGCCACCATCTCCCCGTGATAGCCACACTTGCTCATCGTGGAAGAACAGAATTATTGTGATAGGGGGTGAAGACGGGCATGATTATTATTTGTCTGATGTCCATATCCTTGACACTGATACTCTAATGTGGAGGGAGCTGAGTACATCAGGCCAATTGTTGCCACCTCGAGCTGGTCATTCCACAGTTTCTTTTGGCAAAACCTTGTTTGTATTTGGTGGATTCACAGATGCTCAAAATCTATACAATGACCTTTATATGCTTGATATTGATACTGGTGTTTGGACGAATGTTACAACTACAACCAATTGCCCTTCTGCTAGATTTTCTGTAGCTGGTGACTGTTTAGACCCATTTAAGGGTGGTGTTCTTGTGTTTATCggcggttgtaataaaagtcttgaagccctggatgatatgtattacctacatacagGTTTTGCTAGGGAAAGTGGACAAAGACCAGATAAGTTATCTATGAAGAAGAAATTGAAGCTGAAATGCCAAGAACAAAATCCCAATCCTGGCCAAAATCCAGTTATGGTTGGATATGGAATGGGGGCTACTGGCATTGGCCCGGTCATGACTGTGTTGAATTATAGCCAGCCAAATAGACCAAATATCTCAGCAAATCAATCACTGCCACTTCACGGAAAGAAAATGTTTGAAGCCAAGGTTACTGAAAACATCTCAGAAGGATATACCATTGAAACTGTCATTGATGGAAAGCCTCTTCGTGGAATTCTCTTTTTAAACAAACAACACTCTCTTCAGCCGGCTGCTCATGTTTTCAATAGTTATCAAAGCAGGAAAAGGACTGCTGGTGAAGTTGATGGTGTCATCACAAATGGTACACATTCTGACAATTTAAAGACTCCTAAAGTGCTTAAGCAAAATCAAATGGAAAATAGAGAAGCAGTTCATGGAGACAGTTCAGAATCTCAAAAACACTGTTCTGAAGCTGTCGTTGCAGTTGCAGCAAGCAATCCAATAACTGCCAATGCTTCTGATACCCATAAGGTTTCTGCCAACCCAGAACCAGAAGCTGCTTCTGTGAATCCAAATGCTGAAAAAAATGAAACACCAACATTGGGGGTAAACTTGAAAAATGATGGAGCAAATGAAGTGACAAGTTCCAGAGGTGATGCTCAAACAAATGATCAAGCAAATGTGCTGCCGATTTCCAACATAGAAGCTCAAACAAATGATCAAACAAATGTGCCGCCGATTTCCAACTTAGAAGCTCAAACAAATGATCAAACAAATGTGCCGCCGATTTCCAACTTAGAAGCTCCAAGACTTGATAAAAATAGTGATACACCAAACTGCAACACGGAATTTCTGAAACCTGCCACAGCTGAGAGTGTGAATTTGTCATTTCAAGGTGCAGTGGTGGATTCCACAATTCCAAGGACAGGAGAATGCAGTGAACCAGCAAAAGAAATTTGA 1980 0.4076 MRWEKVEVKAIAKEGEGESGPGKRWGHTCNSINGGKFIYVFGGYGKDNCQTNQVHVFDTVNQTWSQPEIKGSPPTPRDSHTCSVIDEKLYVFGGTDGMNPLKDLHILDTSLQTWESPIIRGEGPEAREGHSAAVVGKRLFIFGGCGKSADNNNEVYYNDLYILNTETLVWMRATTSGTPPSPRDSHTCSSWKNRIIVIGGEDGHDYYLSDVHILDTDTLMWRELSTSGQLLPPRAGHSTVSFGKTLFVFGGFTDAQNLYNDLYMLDIDTGVWTNVTTTTNCPSARFSVAGDCLDPFKGGVLVFIGGCNKSLEALDDMYYLHTGFARESGQRPDKLSMKKKLKLKCQEQNPNPGQNPVMVGYGMGATGIGPVMTVLNYSQPNRPNISANQSLPLHGKKMFEAKVTENISEGYTIETVIDGKPLRGILFLNKQHSLQPAAHVFNSYQSRKRTAGEVDGVITNGTHSDNLKTPKVLKQNQMENREAVHGDSSESQKHCSEAVVAVAASNPITANASDTHKVSANPEPEAASVNPNAEKNETPTLGVNLKNDGANEVTSSRGDAQTNDQANVLPISNIEAQTNDQTNVPPISNLEAQTNDQTNVPPISNLEAPRLDKNSDTPNCNTEFLKPATAESVNLSFQGAVVDSTIPRTGECSEPAKEI 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00877 659 MobiDBLite consensus disorder prediction 592 616 - -
Car07g00877 659 Gene3D - 2 175 IPR015915 GO:0005515
Car07g00877 659 SUPERFAMILY Kelch motif 18 172 IPR015915 GO:0005515
Car07g00877 659 MobiDBLite consensus disorder prediction 531 565 - -
Car07g00877 659 Pfam Galactose oxidase, central domain 36 85 - -
Car07g00877 659 Pfam Galactose oxidase, central domain 136 189 - -
Car07g00877 659 Pfam Galactose oxidase, central domain 87 134 - -
Car07g00877 659 Pfam Galactose oxidase, central domain 233 282 - -
Car07g00877 659 Gene3D - 176 327 IPR015915 GO:0005515
Car07g00877 659 PANTHER KELCH REPEAT DOMAIN 1 578 - -
Car07g00877 659 SMART kelc_smart 245 291 IPR006652 GO:0005515
Car07g00877 659 SMART kelc_smart 37 87 IPR006652 GO:0005515
Car07g00877 659 SMART kelc_smart 194 244 IPR006652 GO:0005515
Car07g00877 659 SMART kelc_smart 88 137 IPR006652 GO:0005515
Car07g00877 659 MobiDBLite consensus disorder prediction 510 565 - -
Car07g00877 659 PANTHER GALACTOSE OXIDASE/KELCH REPEAT SUPERFAMILY PROTEIN 1 578 - -
Car07g00877 659 SUPERFAMILY Kelch motif 124 321 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00877 Car-Chr7 7799772 7806454 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00877 51 310 Acyl Lipid Metabolism Gene Families AT3G05420 30.657 2.30e-28 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00877 - - cam:101509662 1327.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00877 07 7799772 7806454 Car07g00877 07 7799772 7806454 ECH