Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00848 ATGCCTACCGTGAGTGTAGGGCGGGATCGCCTGTTTGCGGCTATAGGAAAAACTTACACACAAGAGGAATTCGAAGACCTATGCTTCAGTTTTGGCATTGAGCTTGACGACGTTACTACAGAAAAGGCAATTGTGAGAAAAGAGAAGCATTTAGAAGAAGAGGCCGATGAGGATGAAGAAGTTATCTACAAAATCGAAATTCCTGCAAACAGATATGACCTACTCTGCCTTGAAGGACTGGCTCAAGCCCTACGAGTTTTCTGTGGGTTCCAGGAAATCCCCACTTACAAATTGGCTGATATTAGTAAGGATGCAATGCTTAAAATGCATGTGAAGCCTGAGACATCTCTGATACGTCCCTTTGTTGTATGTGCTGTATTAAGAGGTTTAACTTTTGATAAAGCGAGATACAACAGCTTTATTGATCTCCAAGACAAGCTTCACCAGAATATTTGTCGGCGAAGAACCCTTGTCGCCATTGGCACTCATGATCTGGATAAACTGGAGGGTCCTTTTACCTATGAGGCTTTGCCACCTACAAGTATCAACTTTACGCCTCTAAAGCAGGAAAGGAGCTTCAGGGCTGATGATCTGATGGAGTTCTACAAATCAGATTTGAAACTGAAGAAATTCTTACATATAATTGAGGACTCTCCCGTTTATCCTGTTTTATATGACAGTAAGAGAACTGTTTTATCTTTACCCCCAATTATCAATGGTGCACATTCAGCCATCACTCTGGAGACAAAGAACGTATTTATTGAATGCACTGCCACTGATCTAACAAAGGCGAAAATTGTTTTAAATACAATGGTAACAGCCTTCTCGGAATATTGTGAAAATAAGTTTGTCATTGAACCGGTTGAAGTGATTTCTTCTGATGGAAAATCTCACATATATCCTGATTTATCTGTTTATGATATGGAAGTTTCCCTAGCTTACATTACTGGATTGATTGGAGTATCGTTGGAGGCAGAACAGGTCACCAAGTTCTTAAACCGGATGCAATTGCATGCCAAGCAATCTACATCTGACAACTTTGTTGTATCTGTACCTCCTACTAGAAGTGATGTTCTTCATCCATGTGATGTTATGGAGGATGTTGCAATAGCTTATGGATTCAATGCTATTAAGGATCAAGCGATAGTCGATAATAAGGGGTCAAAGAGATTGGCTGCTTCCTTGGCACTACTTCCTCTCAATGAGCTGAGTGATCTTATTAGAAAAGAGGTTGCATTGATTGGGTTCACGGAGGTTTTGACATTTATTCTCTGCTCGAAAAAAGAAAACTTTGCCATGCTAAATCGCCAAGATGATAAATCCAAAGCGGTTATCATCGGAAACCCTAGGTCTTCAGACTTCGAGGCTGTCCGGACTAGTCTTATGCCTGGCATTTTGAAAACTGTTGCTCACAACAAGGATCACCCAAAGCCGATAAAGATTTTTGAAGTGGGTGATATAGCTATTTTGGAGGACAAAAATGATGTTGGTGCAAAAAATCTCCGCCAACTTGCTGCACTATACTGTGGTGCTAATGCAGGATTTGAGATAATTCATGGATTGGTGGACAGAGTAATGGAAAAGAATGGGATTACATTTGTTTCACCTGGTGATAAATCAGGGTATTATATTGAGCGGTCAGATGAGCCCGAATTTCTTGCTGGTAGACAAGCTAGAATCATTTACCAGGGAAAGCAGGTTGGGACTTTTGGCATTGTTCATCCAGAGGTATTAAACAACTTTGACATTCCCGATCCCTGCTCCTTTGTTGAACTCAACATTGAAAGTTTCTTGTAA 1797 0.4068 MPTVSVGRDRLFAAIGKTYTQEEFEDLCFSFGIELDDVTTEKAIVRKEKHLEEEADEDEEVIYKIEIPANRYDLLCLEGLAQALRVFCGFQEIPTYKLADISKDAMLKMHVKPETSLIRPFVVCAVLRGLTFDKARYNSFIDLQDKLHQNICRRRTLVAIGTHDLDKLEGPFTYEALPPTSINFTPLKQERSFRADDLMEFYKSDLKLKKFLHIIEDSPVYPVLYDSKRTVLSLPPIINGAHSAITLETKNVFIECTATDLTKAKIVLNTMVTAFSEYCENKFVIEPVEVISSDGKSHIYPDLSVYDMEVSLAYITGLIGVSLEAEQVTKFLNRMQLHAKQSTSDNFVVSVPPTRSDVLHPCDVMEDVAIAYGFNAIKDQAIVDNKGSKRLAASLALLPLNELSDLIRKEVALIGFTEVLTFILCSKKENFAMLNRQDDKSKAVIIGNPRSSDFEAVRTSLMPGILKTVAHNKDHPKPIKIFEVGDIAILEDKNDVGAKNLRQLAALYCGANAGFEIIHGLVDRVMEKNGITFVSPGDKSGYYIERSDEPEFLAGRQARIIYQGKQVGTFGIVHPEVLNNFDIPDPCSFVELNIESFL 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00848 598 Pfam Phe-tRNA synthetase beta subunit B1 domain 1 88 IPR040659 -
Car07g00848 598 Gene3D - 100 304 IPR020825 -
Car07g00848 598 Pfam B3/4 domain 119 280 IPR005146 GO:0003723|GO:0004826
Car07g00848 598 Gene3D - 1 88 - -
Car07g00848 598 SUPERFAMILY PheT/TilS domain 220 280 - -
Car07g00848 598 SMART B5_2 305 374 IPR005147 GO:0000287|GO:0003723|GO:0005524|GO:0006432
Car07g00848 598 SUPERFAMILY Class II aaRS and biotin synthetases 371 597 IPR045864 -
Car07g00848 598 SUPERFAMILY Putative DNA-binding domain 307 378 IPR009061 -
Car07g00848 598 TIGRFAM pheT_arch: phenylalanine--tRNA ligase, beta subunit 1 598 IPR004531 GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432
Car07g00848 598 Pfam Phenylalanyl tRNA synthetase beta chain CLM domain 399 594 IPR041616 -
Car07g00848 598 CDD PheRS_beta_core 401 597 IPR041616 -
Car07g00848 598 SUPERFAMILY Putative DNA-binding domain 5 94 IPR009061 -
Car07g00848 598 PANTHER PHENYLALANINE--TRNA LIGASE BETA SUBUNIT 1 598 - -
Car07g00848 598 PANTHER PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 1 598 IPR045060 GO:0004826|GO:0006432
Car07g00848 598 Pfam tRNA synthetase B5 domain 308 374 IPR005147 GO:0000287|GO:0003723|GO:0005524|GO:0006432
Car07g00848 598 Gene3D - 306 377 - -
Car07g00848 598 Gene3D Bira Bifunctional Protein; Domain 2 398 598 IPR045864 -
Car07g00848 598 ProSiteProfiles B5 domain profile. 303 379 IPR005147 GO:0000287|GO:0003723|GO:0005524|GO:0006432
Car07g00848 598 SMART B3_4_2 118 280 IPR005146 GO:0003723|GO:0004826
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00848 K01890 - gmx:100805249 1109.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00848 07 7521527 7529281 Car07g00848 07 7521527 7529281 ECH