Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00817 ATGGAGCAGCCGCAGTTGAAAGAACTAGCGAGAGGGAAAAGGGTAAAGATGGAAAATGAAAAATGCATGCGTCTTTCTTTGCGCCGATATGGAGAAACAAAACCTTCGGAGCAACTAGATCTCATTATCAACTGTTTTTCACCAACCTCTTTCTCTCTCTCCTCCATTTCTCACTCACTTCCAACCGTTTCTTTCGTATTTCGTAACAGATACAAGGGTTTTTTTGGGATTTCGATGGTTACCGGAGCACCGGAAATGAATTTTGTAAAAAGTAAGGAAGCTGAGAACAATCTTCAGAAGCAAGGTGTTGAAGCTGCTGCTGAAAGAGACGATAACTCGCTTCCCGATGCAACTGATGAAGTTGCTGAGGCCAAGGCACAGCCTGATGCCAAAAGGGTTAAGCTGCAGAAGGAACTAACTTTTCAGGACATGTATCAAAACCAAGAGTTGTTTGCTGAGGATGATGAGGAAGACGATGATTGGGAGCCGTCTCAGTTGAACAAGTGCGTTGAAGTCGCCAAGTGGTTCTGTAAAAATTGTACTATGGATAACCTAGACAATGATGACAATGATGGCTTGTGCGAAACATGTTGGGAACATAAAGATTCTAAAATCGCGAGCTGTGGGCATTATACATCTTCCTTAGCACAAGAGGATCTGATTGAGATCCAGCCAATTATAAAAGATGTTAACTCACAGGAATCAGCTGAAAACAGTTCTACGGCAATTGGCTTTGATGAAAGAATGTTGTTACATGCAGAAGTCGAAATGAAATCAAATCCACATCCCGAAAGGCCAGATCGACTTCAAGCAATTGCTGCTAGTCTTGCTCGAGCTGGTATATTTCCAGGAAGATGCTATTCAATTCCTGCTAGAGAAATCACTCAAGAAGAACTTATGAAGGTTCATACTTTGGAGCATGTTGAATCTGTGGAAGTTACAAGCGAGTTAAAGTCTAGTTATTTCACTCCTGACACATATGCCAATGAGCATTCAGCATGTGCCGCTAGGTTGGCAGCCGGGCTATGTGCTGATCTGGCATCAGCAATTGTTTCTGGGCGTGCCAAAAATGGATTTGCTCTGGTTAGGCCTCCTGGTCATCATGCCGGTGTAAAACGTGTGATGGGGTTTTGCCTTCACAATAATGCTGCAGTGGCAGCATTGGCAGCTCAGGCTGCAGGGGCTAGGAAGGTCCTAATTTTAGATTGGGATGTTCATCATGGAAATGGAACACAGGAAATATTTGATCAAAACAAATCGGTCTTGTATATATCATTGCATAGACATGAGGGAGGACAGTTTTATCCTGGTACTGGAGCTGCTCATGAGGTTGGCAGTATGGGTGCAGAAGGATACTGTGTGAATGTTCCATGGAGTCGAGGTGGTGTTGGTGATAATGATTACTGTTTTGCATTTCAGCATGTTGTACTTCCTATAGCTTCTGAATTTGCTCCAGATTTTACCATAATATCAGCAGGATTTGATGCTGCTAGAGGTGATCCCCTAGGATGTTGTGATGTTACTCCTTCTGGCTATGCACAGATGACTCACATGTTGAATGCCCTTTCTGGTGGAAAAATGCTTGTTATTCTTGAGGGGGGCTATAATCTTCGTTCTATATCGTCTTCTGCAACGAAAGTAATCAAGGTATTGCTGGGTGATGAGAGTCCTGTATGTGAACCGGAAAATAGTTTCCCTACCAAAGCTGGCCTGCAGACTGTTCTTGAAGTCCTCGAAATTCAGATGAAATTTTGGCCTTCCGTGGAACCTATCTTAAGAAATTTGCAGTCACTTTGGAAAATGCACTGTCTTGAGAAAAAAAGCAAACAGACTAAGAAGCGGCGCCGAATTTTGGCACCAATGTGGTGGAGACAATATTTTTTGACAGCCTTGCGGAAGGTTAAGACAGAAATCGGGAAAGAGGGGGGAAGAAGGGACCCCTGGGTTTCAATTCAACGAGTACTTGGGAATTTTCTTACTAATAAATCGGAGACTATGGTGCATGCGCTTGTTATCTTCCTAGAGAACCTCTTGTTGGCAACAGTAAGTTCTGTTTTACTAGTTTTGCCTGCTTACATAGGCAATGATTTGGAGCTTCCAACAGTGCTAAGTTTTGATATTTTGCAGAGTGCAATCGCCAAATTTGCAGGACATAATGCTTCTAAGTTCTAA 2172 0.4291 MEQPQLKELARGKRVKMENEKCMRLSLRRYGETKPSEQLDLIINCFSPTSFSLSSISHSLPTVSFVFRNRYKGFFGISMVTGAPEMNFVKSKEAENNLQKQGVEAAAERDDNSLPDATDEVAEAKAQPDAKRVKLQKELTFQDMYQNQELFAEDDEEDDDWEPSQLNKCVEVAKWFCKNCTMDNLDNDDNDGLCETCWEHKDSKIASCGHYTSSLAQEDLIEIQPIIKDVNSQESAENSSTAIGFDERMLLHAEVEMKSNPHPERPDRLQAIAASLARAGIFPGRCYSIPAREITQEELMKVHTLEHVESVEVTSELKSSYFTPDTYANEHSACAARLAAGLCADLASAIVSGRAKNGFALVRPPGHHAGVKRVMGFCLHNNAAVAALAAQAAGARKVLILDWDVHHGNGTQEIFDQNKSVLYISLHRHEGGQFYPGTGAAHEVGSMGAEGYCVNVPWSRGGVGDNDYCFAFQHVVLPIASEFAPDFTIISAGFDAARGDPLGCCDVTPSGYAQMTHMLNALSGGKMLVILEGGYNLRSISSSATKVIKVLLGDESPVCEPENSFPTKAGLQTVLEVLEIQMKFWPSVEPILRNLQSLWKMHCLEKKSKQTKKRRRILAPMWWRQYFLTALRKVKTEIGKEGGRRDPWVSIQRVLGNFLTNKSETMVHALVIFLENLLLATVSSVLLVLPAYIGNDLELPTVLSFDILQSAIAKFAGHNASKF 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00817 723 Pfam Histone deacetylase domain 262 550 IPR023801 -
Car07g00817 723 PRINTS Histone deacetylase superfamily signature 364 387 IPR000286 -
Car07g00817 723 PRINTS Histone deacetylase superfamily signature 397 412 IPR000286 -
Car07g00817 723 PRINTS Histone deacetylase superfamily signature 485 495 IPR000286 -
Car07g00817 723 PANTHER HISTONE DEACETYLASE-RELATED 103 631 - -
Car07g00817 723 PANTHER HISTONE DEACETYLASE 103 631 - -
Car07g00817 723 CDD HDAC_classII 262 552 - -
Car07g00817 723 SUPERFAMILY Arginase/deacetylase 239 586 IPR023696 -
Car07g00817 723 Gene3D Histone deacetylase domain 233 615 IPR037138 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00817 Car-Chr7 7254015 7267560 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00817 - - mtr:MTR_4g111985 794.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00817 07 7254015 7267560 Car07g00817 07 7254015 7267560 ECH