Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00531 ATGGGTGTATTCACATTTGAGCAAGAAACCGCCTCTACTGTCCCTCCTGCCAAGCTTTACAAAGCTATGGTGAAAGATGCTGATGTCATCATTCCAAAGGCTGTTGATGCCATTAAGACTGTTGAAACCGTTGAGGGAAATGGTGGTCCTGGAACCATCAAGAAACTCACTTTCGTCGAGGGTGGACAAACCTTGTATGTGTTGCACAAAATAGAAGCAATTGATGAAGCAAATTTGGGATATAATTACAGCATAGTTGGGGGTGCAGGATTGTCAGAGACAGTGGAAAAGATATCATTTGAGGCAAAATTGTGTGAAGGCCCAAATGGAGGGTCCATTGGGAAGGTGAGCGTAAAATATCAAACCAAAGGAGATGCTAAGCCCAATGAGAAGGAGGTTCAAGAAGGAAAGGCAAAGGGTGATGCTCTTTTCAAGGCCATTGAGGGTTACGTTTTGGCCAATCCTAATTACAACTGA 477 0.4361 MGVFTFEQETASTVPPAKLYKAMVKDADVIIPKAVDAIKTVETVEGNGGPGTIKKLTFVEGGQTLYVLHKIEAIDEANLGYNYSIVGGAGLSETVEKISFEAKLCEGPNGGSIGKVSVKYQTKGDAKPNEKEVQEGKAKGDALFKAIEGYVLANPNYN 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00531 158 ProSitePatterns Pathogenesis-related proteins Bet v I family signature. 88 120 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Car07g00531 158 PANTHER ABA-RESPONSIVE PROTEIN 1 157 - -
Car07g00531 158 Pfam Pathogenesis-related protein Bet v 1 family 1 154 IPR000916 GO:0006952
Car07g00531 158 CDD Bet_v1-like 4 151 - -
Car07g00531 158 PANTHER - 1 157 - -
Car07g00531 158 SUPERFAMILY Bet v1-like 2 158 - -
Car07g00531 158 Gene3D - 2 158 IPR023393 -
Car07g00531 158 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Car07g00531 158 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Car07g00531 158 PRINTS Major pollen allergen Bet V1 signature 49 58 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Car07g00531 158 PRINTS Major pollen allergen Bet V1 signature 65 84 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Car07g00531 158 PRINTS Major pollen allergen Bet V1 signature 84 97 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Car07g00531 158 PRINTS Major pollen allergen Bet V1 signature 109 125 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Car07g00531 158 PRINTS Major pollen allergen Bet V1 signature 143 153 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00531 Car-Chr7 4714807 4715763 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00531 - - gmx:100500525 259.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00531 07 4714807 4715763 Car07g00531 07 4714807 4715763 ECH
Car01g00969 01 9076347 9078095 Car07g00531 07 4714807 4715763 PCT