Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00520 ATGTTTCTCTTTGATTGGTTCTATGGAATTTTGGCTTCACTTGGTCTTTGGCAAAAGGAGGCGAAAATTTTATTTTTAGGGTTAGATAATGCTGGAAAAACCACTTTGCTTCACATGCTCAAAGACGAGAGATTAGTTCAGCATCAACCAACTCAACATCCAACGTCAGAGGAATTGAGTATTGGAAAGATAAAGTTTAAAGCTTTTGATTTGGGTGGTCACCAGATTGCACGCAGGGTTTGGTCTGATTATTATTCTCAGGTGGATGCTGTAGTTTACCTGGTTGACGCATACGACAAGGAAAGGTTTACGGAATCAAAGAATGAACTGAATGCTCTTCTTTCTGATGGGTCGTTAGCAAATGTACCTTTCCTTATCTTAGGAAACAAGATTGACATTCCTTATGCTGCTTCAGAGGACGAGTTGCGCTATCATTTGGGCCTGACTAACTTCACTACCGGCAAGGGCAAGGTTAATCTTTCCGACTCGAATGTTCGTCCTTTGGAAGTGTTCATGTGTAGTATTGTCCGCAAGATGGGATATGGTGAAGGCTTTAAGTGGCTTTCTCAGTATATTTAA 579 0.4076 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWSDYYSQVDAVVYLVDAYDKERFTESKNELNALLSDGSLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLSDSNVRPLEVFMCSIVRKMGYGEGFKWLSQYI 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00520 192 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 192 IPR027417 -
Car07g00520 192 ProSiteProfiles small GTPase Arf family profile. 14 192 - -
Car07g00520 192 CDD Sar1 2 192 - -
Car07g00520 192 ProSiteProfiles small GTPase SAR1 family profile. 14 192 - -
Car07g00520 192 PANTHER RE74312P 1 192 IPR006687 GO:0005525|GO:0006886
Car07g00520 192 PRINTS GTP-binding SAR1 protein signature 22 45 IPR006689 GO:0003924|GO:0005525
Car07g00520 192 PRINTS GTP-binding SAR1 protein signature 50 74 IPR006689 GO:0003924|GO:0005525
Car07g00520 192 PRINTS GTP-binding SAR1 protein signature 77 102 IPR006689 GO:0003924|GO:0005525
Car07g00520 192 PRINTS GTP-binding SAR1 protein signature 122 143 IPR006689 GO:0003924|GO:0005525
Car07g00520 192 PRINTS GTP-binding SAR1 protein signature 166 190 IPR006689 GO:0003924|GO:0005525
Car07g00520 192 PANTHER GTP-BINDING PROTEIN SAR1A 1 192 - -
Car07g00520 192 SMART sar_sub_1 4 192 IPR006689 GO:0003924|GO:0005525
Car07g00520 192 Pfam ADP-ribosylation factor family 8 192 IPR006689 GO:0003924|GO:0005525
Car07g00520 192 Gene3D - 1 192 IPR027417 -
Car07g00520 192 SMART arf_sub_2 4 191 - -
Car07g00520 192 TIGRFAM small_GTP: small GTP-binding protein domain 19 135 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00520 Car-Chr7 4604167 4606437 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00520 K07953 - cit:102617360 370.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00520 07 4604167 4606437 Car07g00520 07 4604167 4606437 ECH