Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00512 ATGGCGGACAAGTACAACATGAAGAATCCAGCCGTTAAGCGGATTCTCCAAGAGGTTAAGGAGATGCAATCGAATCCTTCCGATGATTTCATGAGCCTTCCTCTCGAGGAAAATATATTTGAATGGCAATTTGCAATTAGGGGACCTGGTGAAACTGAGTTTGAGGGTGGTATTTATCATGGAAGGATTCAGTTGCCTGCTGAATATCCATTCAAACCTCCTTCATTTATGTTGTTGACACCTAATGGTCGTTTTGAGACTCAAACCAAGATTTGCTTGAGCATATCAAATCATCACCCTGAGCACTGGCAACCATCATGGGGCGTAAGGACTGCTCTAGTTGCACTGATTGCATTCATGCCCACCAACCCAAATGGTGCCTTGGGTTCATTGGACTACAAGAAAGAAGATAGGCGTGCCTTGGCCATCAAATCCCGTGAAGCATCTCCTAAATTTGGGTCTCCTGAACGTCAGAAACTGATTGATGAGATTCATGAGTATATGCTAAGCAAGGCAGTCCCTATTCCTCAACCTAGCCCTTCGCCGGCTTCTGAAGAACCAAAAAATGAGGAGGCCGAGACCCAAGTTACTTTACCAAATCCTGAGGCCGAGACCCAAATCACTTTACAAAATCCTGAGGCACTACCTGCAGAAGAGGGTATTCTAGATCAAGCAGGTGACAGAATAGTTGAAGAACAACAAGAAGTCCCTGTCAATGTTAATCCAAACCCGGCAGGAGTTGAAGCTTCAAAAGATATTCCATCCAGCAGCGTCTCAAACAATCAGTTGCTCCAAAAGCCAGATGGAAGGGTTCAAAATGTGAAACCAGAGACAAGGGTTCAAAAACCTGACGACCGATTGTTCACATTGGCAGCTATTGGGCTTGCTATAGCAATTATGGTTCTTTTGCTGAAGAAATTCATTAAATCTACAGAACATGGAGCCGTTTTCATGTATGGATCTTAG 966 0.441 MADKYNMKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGETEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWGVRTALVALIAFMPTNPNGALGSLDYKKEDRRALAIKSREASPKFGSPERQKLIDEIHEYMLSKAVPIPQPSPSPASEEPKNEEAETQVTLPNPEAETQITLQNPEALPAEEGILDQAGDRIVEEQQEVPVNVNPNPAGVEASKDIPSSSVSNNQLLQKPDGRVQNVKPETRVQKPDDRLFTLAAIGLAIAIMVLLLKKFIKSTEHGAVFMYGS 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00512 321 Pfam Ubiquitin-conjugating enzyme 14 125 IPR000608 -
Car07g00512 321 MobiDBLite consensus disorder prediction 237 269 - -
Car07g00512 321 MobiDBLite consensus disorder prediction 250 268 - -
Car07g00512 321 SUPERFAMILY UBC-like 11 132 IPR016135 -
Car07g00512 321 CDD UBCc 12 151 IPR000608 -
Car07g00512 321 SMART ubc_7 13 173 - -
Car07g00512 321 MobiDBLite consensus disorder prediction 173 201 - -
Car07g00512 321 Gene3D Ubiquitin Conjugating Enzyme 2 172 IPR016135 -
Car07g00512 321 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 10 165 IPR000608 -
Car07g00512 321 PANTHER BNAC01G21910D PROTEIN 6 319 - -
Car07g00512 321 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 6 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00512 Car-Chr7 4526468 4528767 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00512 1 318 Miscellaneous Gene Families AT3G17000 63.914 6.85e-138 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00512 K10578 - gmx:100804054 480.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00512 07 4526468 4528767 Car07g00512 07 4526468 4528767 ECH