Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00509 ATGAACTCCATCCCTTCTCCACCTCCATCTTCTTCTTCCTCTTCAAATTTCACTCTCTTCACTCACTCCAAAACCCCCAACTATCTCTTCAAATTCAGCCTCAAAATACCCATTTTACCCTTCCACTCTTCATCTTCCCATCTCACTTCACATCCACCATGCTGCACTCTCGGAGACTCAACTTCCTTGCTTGACAAAAATGCCCCTCCCTCCGAACATATTTCCCGCAACGACGTTCCACCGAAAGAAATGCTCGTGGTTCGCCGGCCGGTGAAGGAGTTTTCCGGCGAAGTATCCGACGAAGAGGAAGAAGTGAAGGAAACGGTGGAAGATAAAATTAAAGGTTCTTCAATTGATGATGGACTAACGAATTTTGCGAAGAAGATGCCGATGTTTGAACCGGAGAGAGTCGAATCGGATTCCACAGAGAAGCCTCTGACTGTGAATTTGGATTTGTCGTTATATAAGGCGAAGGTTTTAGGTAGAAGCTTTCGTTATGAAGAAGCAGAGGCAATACTTCAGAAGTGTATATGCTATTGGCCGGAAGATGGTCGACCTTATGTAGCACTTGGGAAATATTTGAGCAAGCAATCTAAAAATAGCCAAGCCAGAGAGATTTATGAGAAGGGTTGCCAAGCTACTCAGGGTGAAAATGCCTTCATTTGGCAGTGTTGGGCTGTTCTTGAAAAGAAAATGGGAAATATCAGGAGAGCTAGAGAGCTTTTTGACGCTGCAACGGTTGCTGATAAGAAGCATGTTGCTGCTTGGCATGGTTGGGCAGTTCTAGAGTTAAAGCAAGGAAATATAACGAAGGCAAGGAATCTTCTTTCAAAAGGTCTTCAATATTGTGGACAGAATGAGTACATATACCAAACACTTGCATTGCTTGAAGCTAAAGCAAATCGATATCAGCAGGCTCAATATTTATTCAATCAGGCCACAAAGTGCAATCCTAAAAGCTGTGCTAGTTGGCTTGCTTGGGCTCAAATGGAGGTTGAACAGGAAAACTATCGTACTGCTAGGAAATTGTTTGAGAATGCAGTGAAGGCAAGTCCTAAAAATAGGTTTACTTGGCATGTATGGGGTGTTTTTGAAGCTAACATGGGAAACATTGACAAGGGAAAAAAGCTTCTAAAGATAGGTCATGCTCTAAATCCAAGGGATGCCGTTCTTCTTCAGTCTCTTGCATTAATAGAATACAAACACTCAAGTGCAAACCGTGCTCGGGTTTTGTTCAAGGGAGCATCTCAATTGGATCCAAAGCATCAACCTGTTTGGTTTGCTTGGGGTTGGATGGAATGGAAGGAAGGAAACTTGAATACAGCTAGAGAATTATACCAAAAGGCTTTATCAATTGATCCAAACAGTGAAAGTGCTGCTAGGTGTCTCCAGGCATGGGGTGTTCTGGAGCAGAGGGTTGGCAATCTTTCAGCTGCACGTAGATTGTTTAGATCCTCATTGAATATAAATTCTCAGAGTTATGTGACATGGATGACTTGGGCATCACTAGAAGAAGATCAAGGAAATCCTGTACGCGCTGAAGAGATTCGTAACCTTTATTTCCAGCAGCGCACGGAAGTTGTAGATGATGCTTCCTGGGTTATGGGATTCTTAGATATTTTAGACCCTGCCATTGACAGTTTGAAGAGACTCTTGAAGATGGACCCAAATTCATTTAACATGGCACCAGAGTCCGTGAGAAATATTACCGGAACAAAGAAAAACCCAGTTGATTTTTCTAGtgacgatgatgataatgatgtggaagatgatAGTAAGTTTGATTTGGATGCTTTCATTATGGAAAGGTTATCCTTCGATGTGTCGAAGCTTGAAGTTCAATTGGAAACACCAAAAAAAACTTTTACAAACAAAATTTTGTCTCCAAGAAGGGTATGGCGATCAAATAATAGATTTGCCAAAGTGTAA 1929 0.4132 MNSIPSPPPSSSSSSNFTLFTHSKTPNYLFKFSLKIPILPFHSSSSHLTSHPPCCTLGDSTSLLDKNAPPSEHISRNDVPPKEMLVVRRPVKEFSGEVSDEEEEVKETVEDKIKGSSIDDGLTNFAKKMPMFEPERVESDSTEKPLTVNLDLSLYKAKVLGRSFRYEEAEAILQKCICYWPEDGRPYVALGKYLSKQSKNSQAREIYEKGCQATQGENAFIWQCWAVLEKKMGNIRRARELFDAATVADKKHVAAWHGWAVLELKQGNITKARNLLSKGLQYCGQNEYIYQTLALLEAKANRYQQAQYLFNQATKCNPKSCASWLAWAQMEVEQENYRTARKLFENAVKASPKNRFTWHVWGVFEANMGNIDKGKKLLKIGHALNPRDAVLLQSLALIEYKHSSANRARVLFKGASQLDPKHQPVWFAWGWMEWKEGNLNTARELYQKALSIDPNSESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYVTWMTWASLEEDQGNPVRAEEIRNLYFQQRTEVVDDASWVMGFLDILDPAIDSLKRLLKMDPNSFNMAPESVRNITGTKKNPVDFSSDDDDNDVEDDSKFDLDAFIMERLSFDVSKLEVQLETPKKTFTNKILSPRRVWRSNNRFAKV 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00509 642 Coils Coil 91 111 - -
Car07g00509 642 ProSiteProfiles TPR repeat profile. 287 320 IPR019734 GO:0005515
Car07g00509 642 SMART tpr_5 321 354 IPR019734 GO:0005515
Car07g00509 642 SMART tpr_5 219 252 IPR019734 GO:0005515
Car07g00509 642 SMART tpr_5 389 422 IPR019734 GO:0005515
Car07g00509 642 SMART tpr_5 150 183 IPR019734 GO:0005515
Car07g00509 642 SMART tpr_5 460 493 IPR019734 GO:0005515
Car07g00509 642 SMART tpr_5 287 320 IPR019734 GO:0005515
Car07g00509 642 SMART tpr_5 184 217 IPR019734 GO:0005515
Car07g00509 642 SMART tpr_5 253 286 IPR019734 GO:0005515
Car07g00509 642 SMART tpr_5 423 456 IPR019734 GO:0005515
Car07g00509 642 Pfam Tetratricopeptide repeat 425 455 IPR013105 -
Car07g00509 642 SMART hat_new_1 267 299 IPR003107 GO:0006396
Car07g00509 642 SMART hat_new_1 335 367 IPR003107 GO:0006396
Car07g00509 642 SMART hat_new_1 233 265 IPR003107 GO:0006396
Car07g00509 642 SMART hat_new_1 437 472 IPR003107 GO:0006396
Car07g00509 642 SMART hat_new_1 403 435 IPR003107 GO:0006396
Car07g00509 642 SMART hat_new_1 474 506 IPR003107 GO:0006396
Car07g00509 642 SMART hat_new_1 301 333 IPR003107 GO:0006396
Car07g00509 642 SMART hat_new_1 198 231 IPR003107 GO:0006396
Car07g00509 642 SUPERFAMILY TPR-like 352 559 IPR011990 GO:0005515
Car07g00509 642 ProSiteProfiles TPR repeat profile. 423 456 IPR019734 GO:0005515
Car07g00509 642 ProSiteProfiles TPR repeat profile. 321 354 IPR019734 GO:0005515
Car07g00509 642 Gene3D Tetratricopeptide repeat domain 156 393 IPR011990 GO:0005515
Car07g00509 642 Gene3D Tetratricopeptide repeat domain 394 557 IPR011990 GO:0005515
Car07g00509 642 SUPERFAMILY TPR-like 166 399 IPR011990 GO:0005515
Car07g00509 642 MobiDBLite consensus disorder prediction 569 588 - -
Car07g00509 642 PANTHER PROTEIN HIGH CHLOROPHYLL FLUORESCENT 107 5 636 IPR044624 GO:0003729|GO:0006397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00509 - - mtr:MTR_4g122060 1053.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00509 07 4491777 4496052 Car07g00509 07 4491777 4496052 ECH