Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00499 ATGTGTCCTTCTGGCCGAACCCTCCGCCCTCAACCTTCCACGTCAGATTTTCGTCCGGCATTCGACATTCTAGACGCCGATTCCGACGGCAAAATAAGCCGCGAAGACCTCCGCTCGTTCTATGCCACCGTTAGCGGAGGCGTCAATGGCGGAGACGACGCCATCCGTGCGATGATGTCGGTAGCGGACACGAACATGAACGGATTCGTGGAGTACGAGGAATTCGAACGCGTGGTAAGCGGAAACGGAGAAAAGAAACCGTTAGGATGTGGGGCCATGGAAGATGTGTTTAGGGTGATGGATAGAGACGGTGACGGTAAACTTAGCCACCATGATTTGAAGAATTATATGGCTTGGGCTGGCTTTGTTGCCACCGATGATGAAATAAGCGCTATGATCAAATTTGGTGGTGGCGATCGAGACGGTGGCGTTAGTTTTGATGGTTTGGTTCGTATATTAGCTTTTGATCATTCCGCCGCCTCTGCTAATTGA 492 0.5122 MCPSGRTLRPQPSTSDFRPAFDILDADSDGKISREDLRSFYATVSGGVNGGDDAIRAMMSVADTNMNGFVEYEEFERVVSGNGEKKPLGCGAMEDVFRVMDRDGDGKLSHHDLKNYMAWAGFVATDDEISAMIKFGGGDRDGGVSFDGLVRILAFDHSAASAN 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00499 163 Pfam EF hand 93 115 IPR002048 GO:0005509
Car07g00499 163 ProSitePatterns EF-hand calcium-binding domain. 101 113 IPR018247 -
Car07g00499 163 SUPERFAMILY EF-hand 12 155 IPR011992 -
Car07g00499 163 SMART efh_1 16 44 IPR002048 GO:0005509
Car07g00499 163 SMART efh_1 54 82 IPR002048 GO:0005509
Car07g00499 163 SMART efh_1 92 120 IPR002048 GO:0005509
Car07g00499 163 ProSitePatterns EF-hand calcium-binding domain. 25 37 IPR018247 -
Car07g00499 163 ProSiteProfiles EF-hand calcium-binding domain profile. 12 47 IPR002048 GO:0005509
Car07g00499 163 ProSiteProfiles EF-hand calcium-binding domain profile. 50 85 IPR002048 GO:0005509
Car07g00499 163 Gene3D - 6 161 - -
Car07g00499 163 ProSiteProfiles EF-hand calcium-binding domain profile. 93 123 IPR002048 GO:0005509
Car07g00499 163 PANTHER TROPONIN 1 159 - -
Car07g00499 163 Pfam EF-hand domain pair 17 79 IPR002048 GO:0005509
Car07g00499 163 ProSitePatterns EF-hand calcium-binding domain. 63 75 IPR018247 -
Car07g00499 163 PANTHER CALCIUM-BINDING PROTEIN CP1 1 159 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00499 1 153 EF-hand Containing Proteins AT5G49480 53.704 1.36e-52 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00499 K02183 - gmx:100527230 236.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00499 07 4407251 4408225 Car07g00499 07 4407251 4408225 ECH