Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00474 ATGACGGTTGTTTCACTCTTCCTTACCGCCACCAAACTCGCCGGAGCTCTAGTCACTCTCTCCGTCGCCGCCAATGCCTTTTCCTTCTCTCGTTTCCGCAACAAAAATCTGCGCCCTTTTCGTTCCCCTATCGACGACTCCTCCGATACTCTCGCCGTTTTCAACATTACCGATGAAGAAAATGGGTTTTTCTTTGGTCTGGCAACAGCACCGGCACATGTTGAGGATAGGCTTGATGATGCTTGGATACAGTTTGCTGAACAAGAGAGTAGTGGTGGTGCTGAGCAGAAAGTTGATGCTTTGATGGGCTCTGCCACTGGTGATGGTGGGTCTCAGCCAGCTGCATCGTCTCCACAACATGCTAATAAGGGCAACAAGAAGTCTCTTAAAGTTGCTATGGAGGCCATGATCAGAGGATTTGAGAAGTACATGGAGGTAGAAGGACATGAAGGAGAAGAAGAACAATGCCATCCTAATGTTACTGCTTGGCATAATGTTCCACACCCGGAGGAGAGGTTAAGGTTTTGGACTGATCCTGATACAGAACTAAAATTGGCAAAGGATACTGGTGTTACTGTTTTTCGAATGGGAATTGACTGGTCAAGAATCATGCCCCATGAGCCAGTAAACGGCCTTAAAGAATCTGTCAACTATGCTGCATTGGAGCGTTATAAGTGGATTATCAATAGGGTTCGATCGTATGGAATGAAGGTGATGCTTACTCTTTTCCATCACTCACTTCCACCCTGGGCTGGTGATTATGGAGGTTGGAAGCTGGAAAAGACAGTGGATTATTTCATGGACTTTACCAGGCTTGTTGTTGACAGTGTATCAGATTTTGTAGACTATTGGGTAACATTTAACGAGCCCCATGTCTTCTGTATGCTTACTTATTGTGCTGGCACCTGGCCTGGTGGTCATCCTGATATGCTGGAGGCTGCTACTTCAGCACTTCCTACAGGTGTTTTCCAGCAGGCCATGCATTGGATGTCTATTGCACACTCAAAGGCATATGATTACATCCATGAACTCAGTAACTCATCAAAATCAATAGTTGGTGTTGCGCATCACGTGTCGTTTATGCGACCCTATGGTCTGTTTGATACAGCTGCCGTTTTACTGGCTAACTCATTGTCTCTCTTCCCATACATCGATGAGATATCTAAAAAGCTGGACTTCATTGGCATTAACTATTATGGCCAGGAAGTGGTTTCGGGGGCTGGTTTGAAGCTAGTGGAAAATGATGAGTACAGTGAGTCTGGTCGTGGGGTATATCCTGATGGCTTATATCGCATGTTGCTTCAGTTCCATGAACGTTACAAGCATCTAAATGTCCCCTTCATTATTGCTGAAAATGGAGTTTCGGATGAAACAGATTTGATCCGCCGGCCATATCTCTTGGAGCATTTGCTTGCTGTTTATGCAGCTATGATCAAGGGTGTACCTGTGCTTGGTTACCTGTTCTGGACTATTTCTGATAATTGGGAGTGGGCTGATGGATATGGTCCCAAGTTTGGACTTGTTGCAGTTGACCGGGCAAATAATCTTGCACGGGTCCCCCGCCCTTCTTACCATCTGTTTTCTAAAGTTGTGAATACTGGTAAAGTTACACGCGAAGATCGTGAAGGTGCTTGGAATGAACTTCAAATAGCTGCTAAAGAGAAGAAAACAAGACCATTTTATCGGGCAACCGACAAACATGGTTTGATGTATGCAGGTGGACTTGATGAGCCGAATCAGCGGTCTTATATAGAAAGAGATTGGCGGTTTGGTCATTATGAGATGGATGGTCTCCAGGATAACTTAAGCCGCTTCTCGAGATTCATTATTGAACCATTCTCCCTACTAAAAAGGAAAAAGAAATCTCAAAAGAAGAATGACAAATTAGTTCTTCAACCTCTTTGA 1905 0.4467 MTVVSLFLTATKLAGALVTLSVAANAFSFSRFRNKNLRPFRSPIDDSSDTLAVFNITDEENGFFFGLATAPAHVEDRLDDAWIQFAEQESSGGAEQKVDALMGSATGDGGSQPAASSPQHANKGNKKSLKVAMEAMIRGFEKYMEVEGHEGEEEQCHPNVTAWHNVPHPEERLRFWTDPDTELKLAKDTGVTVFRMGIDWSRIMPHEPVNGLKESVNYAALERYKWIINRVRSYGMKVMLTLFHHSLPPWAGDYGGWKLEKTVDYFMDFTRLVVDSVSDFVDYWVTFNEPHVFCMLTYCAGTWPGGHPDMLEAATSALPTGVFQQAMHWMSIAHSKAYDYIHELSNSSKSIVGVAHHVSFMRPYGLFDTAAVLLANSLSLFPYIDEISKKLDFIGINYYGQEVVSGAGLKLVENDEYSESGRGVYPDGLYRMLLQFHERYKHLNVPFIIAENGVSDETDLIRRPYLLEHLLAVYAAMIKGVPVLGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARVPRPSYHLFSKVVNTGKVTREDREGAWNELQIAAKEKKTRPFYRATDKHGLMYAGGLDEPNQRSYIERDWRFGHYEMDGLQDNLSRFSRFIIEPFSLLKRKKKSQKKNDKLVLQPL 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00474 634 SUPERFAMILY (Trans)glycosidases 159 538 IPR017853 -
Car07g00474 634 PANTHER GLYCOSYL HYDROLASE 3 592 IPR001360 GO:0004553|GO:0005975
Car07g00474 634 Gene3D Glycosidases 142 545 - -
Car07g00474 634 PANTHER GALACTOLIPID GALACTOSYLTRANSFERASE SFR2, CHLOROPLASTIC 3 592 - -
Car07g00474 634 Pfam Glycosyl hydrolase family 1 385 533 IPR001360 GO:0004553|GO:0005975
Car07g00474 634 Pfam Glycosyl hydrolase family 1 180 364 IPR001360 GO:0004553|GO:0005975
Car07g00474 634 MobiDBLite consensus disorder prediction 109 124 - -
Car07g00474 634 MobiDBLite consensus disorder prediction 102 126 - -
Car07g00474 634 PRINTS Glycosyl hydrolase family 1 signature 390 404 IPR001360 GO:0004553|GO:0005975
Car07g00474 634 PRINTS Glycosyl hydrolase family 1 signature 447 455 IPR001360 GO:0004553|GO:0005975
Car07g00474 634 PRINTS Glycosyl hydrolase family 1 signature 459 470 IPR001360 GO:0004553|GO:0005975
Car07g00474 634 PRINTS Glycosyl hydrolase family 1 signature 480 497 IPR001360 GO:0004553|GO:0005975
Car07g00474 634 PRINTS Glycosyl hydrolase family 1 signature 504 516 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00474 Car-Chr7 4218835 4225847 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00474 4 610 Glycoside Hydrolase AT3G06510 63.256 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00474 K21362 - gmx:100792401 1086.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00474 07 4218835 4225847 Car07g00474 07 4218835 4225847 ECH