Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00466 ATGGGTTATATGGTATTGAAACCGCTATATTTAGTTCAAAATTTAATGAAAATGAAGAAGTGGTATGGAGGCCTGTTGATCTTGGCTTTGTGTATGATGCTGTTTCTACTGTACAGTCTGAAAGGAATTCAGCCACAGAAGCAGCCAGCGAAACAGTCAGCATACAGTTTTTTCAATAACCATTCAACAAATGATTCTGGTCAAGGAAGCAGCAATGTTGCAGTAACCTCTTTTGATGTAGAACCGAAAAGCGTACCAAAACCAACCATTAGGCCACATTTAGTACATGTCGCGGGGCTTGATGATCTGTATGACATGAAAAATTTATCTGAAGGAGCGATGAATGTTGTACTTGCTTGGACTTCTTTACGCTCCTTGCTGTCAAGGTCAGATGCTTTGCCTGAATTAGCTCAAGGAGTTAAAGAGGCTTCTGTAGCATGGAAAGAGTTGTTGTCCACCGTTGAAAACGACAAAGCCTCCAAGATTAGTAAGATGGACAGCCCGGAAAATCAAAACTGTCCGTTCTCTGTGATCGCATTTGGCAAGACGGTAGCAGATAGTGGAATCACTCTGGATCTCCCTTGTGGTATGGTCGTAGATTCTTCAATTACATTGATTGGCATCCCTAATGGACAAAACAGAAGCTTTCAGATTGACCTAGCTGGGCAAGATCTAGAAGAGGAGCCAGATCCTCCAATTATCTTGCATTATAATGTGAGTCTTCCGGGAGAAAACATAACAGAGGAACCGTATATCGTTCAAAATACATGGACTAATGATTTCGGTTGGGGAAAAGAGGAAAGGTGTCCTACTCATGGTTCTGCTAAGTCTAACATTCACAAAGTTGATGAGCTTGTTCTCTGCAATGTACAAGCTGTGAGAAACAACAATGAAGAGAATGTAAATGTTGGTCAACCTACTAGTGACATACCTTCTAATATTTCCTCAGAAAGTGCACATAGAACTGCTAATTTCCCTTTTTCTGAGGGTAATCCTTTCACTGCCACGTTGTGGGTTGGTTCAGAAGGATTTCATATGACTGTGAATGGAAGACATGAAACATCTTTTGCATATAGGGAGAAGCTTGAACCGTGGTTAGTCAGCACCGTTAAAGTAGCAGGAAGTCTAAGTCTTTTATCAGTCCTGGCAAAAGGTTTACCTGTTGCCGAAGATAATGATTTAGTTGTTGATGTTGAAAACCTGAAGGCTCCTTCTATCACCAGAAAAAGGCTTGTTTTGTTGATTGGAGTGTTCTCTTCCGGAAATAACTTTGAGCGCCGAATGGCTCTGAGGAGGTCTTGGATGCAATATGAGGCTGTACGTTCTGGAGAAGTTGCTGTCAGATTTTTCATTGGGCTTCATAAGAACAATAGAGTTAATCTTGAATTGTGGAGGGAAGCTCAAGCATATGGAGACATCCAGTTAATGCCTTTTGTTGATTATTATAGTTTGATTTCATTAAAGACAATTGCAATTTGCATTGTGGGGACAAAAATAATTCCTTCAAAATACATCATGAAAACAGATGATGATGCTTTTGTAAGGATTGATGAAGTACTTTCCAGCCTCAAAGGGAAGCCATCTAAAGGCCTCCTGTATGGTCTAATATCTCCTATATCATCTCCTGATAGGAATAAGGACAGTAAATGGTACAGCAGTGAGAAGGAATGGCCACATGATACATACCCACCATGGGCACATGGTCCTGGCTATGTCATCTCTCGCGACATAGCAAAATTCGTTGTCTATGGCCACCAAGAAAGAAAACTCAAATTCTTTAAATTAGAAGATGTTGCCATGGGGATATGGATTGAACAGTTTAAAAATGGTGATAAAGAAGTGCACTATGAGAATGATGGGAGGTTTTATAATGCTGGATGTGATACAAATTATGTACTAGCCCATTATCAAAGCCCAAGAATGGTGCTATGCCTTTGGGAGAAACTGCAAAAAGAACACAAGTCAGAATGCTGTGAGTAG 1980 0.404 MGYMVLKPLYLVQNLMKMKKWYGGLLILALCMMLFLLYSLKGIQPQKQPAKQSAYSFFNNHSTNDSGQGSSNVAVTSFDVEPKSVPKPTIRPHLVHVAGLDDLYDMKNLSEGAMNVVLAWTSLRSLLSRSDALPELAQGVKEASVAWKELLSTVENDKASKISKMDSPENQNCPFSVIAFGKTVADSGITLDLPCGMVVDSSITLIGIPNGQNRSFQIDLAGQDLEEEPDPPIILHYNVSLPGENITEEPYIVQNTWTNDFGWGKEERCPTHGSAKSNIHKVDELVLCNVQAVRNNNEENVNVGQPTSDIPSNISSESAHRTANFPFSEGNPFTATLWVGSEGFHMTVNGRHETSFAYREKLEPWLVSTVKVAGSLSLLSVLAKGLPVAEDNDLVVDVENLKAPSITRKRLVLLIGVFSSGNNFERRMALRRSWMQYEAVRSGEVAVRFFIGLHKNNRVNLELWREAQAYGDIQLMPFVDYYSLISLKTIAICIVGTKIIPSKYIMKTDDDAFVRIDEVLSSLKGKPSKGLLYGLISPISSPDRNKDSKWYSSEKEWPHDTYPPWAHGPGYVISRDIAKFVVYGHQERKLKFFKLEDVAMGIWIEQFKNGDKEVHYENDGRFYNAGCDTNYVLAHYQSPRMVLCLWEKLQKEHKSECCE 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00466 659 Gene3D - 187 383 - -
Car07g00466 659 Gene3D - 400 625 - -
Car07g00466 659 Pfam Galactosyltransferase 425 608 IPR002659 GO:0006486|GO:0016020|GO:0016758
Car07g00466 659 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 105 651 IPR002659 GO:0006486|GO:0016020|GO:0016758
Car07g00466 659 CDD GLECT 190 381 IPR001079 GO:0030246
Car07g00466 659 SUPERFAMILY Concanavalin A-like lectins/glucanases 190 384 IPR013320 -
Car07g00466 659 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE GALT1 105 651 - -
Car07g00466 659 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 189 384 IPR001079 GO:0030246
Car07g00466 659 SMART galectin_3 187 384 IPR001079 GO:0030246
Car07g00466 659 Pfam Galactoside-binding lectin 190 382 IPR001079 GO:0030246
Car07g00466 659 SMART Gal_bind_lectin_2 193 383 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00466 Car-Chr7 4150191 4155842 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00466 16 659 Glycosyltransferase AT3G06440 52.087 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00466 K20843 - gmx:100816729 1063.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00466 07 4150191 4155842 Car07g00466 07 4150191 4155842 ECH
Car07g00466 07 4150191 4155842 Car02g00751 02 10417061 10423010 PCT