Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car07g00387 | ATGTTGAGGAAGAGACCCTCTCCAATGATCGGAAAAATATCAGAATTATTGGTATCCGGTGGCCGGATTATGGACACCACCGGAAGCCCAAGAGGCCCATTAGACACAAAGATGCAATCACCAAGGGGCCTAAAAAACTATCATGACCTTGGTGGTGTTGGTCTCAAAATTGTGGTAGCTCTTGATAATAATAAATCATGTGAAGTAGGGCGTGAAATTTTGCCCAAACATGCTGTTTGTACCTCGAATTTGAATCGATCAAGACCAATCCAAGTTCAATCCGTGAAAAACCCAAATGGATTTCACAAGGATTATTCAAGTTTGAATGAAATTGACATGGGAAGCTTAGAAGAATACACCTATGTTACATGTCACGTGCCTAATAAAACCTTTACTAAGGTTTATTACGATGGTGGTGAAGGTGATGTTCGAATCCAACATGATTATAACTTTAACAACAACGTTGGTGTTCTAAGAAGATCCTCACAGCCACAAATTTTAATTGAGCCCGAACCATTATTTCCTACATCAAATTTTCTTAAATCATGTCACTTATGTGGAAAGGAACTCCAAGGCAAAGATATATACATGTACAGAGGAGAGAAAGGATTTTGTAGTACAGAGTGTCGTTCAAATCAAATAATGATGGATGAACGAAAAGAGAGGTGTGGCTCAGAAGCTTCAAGGTCTGGAGAATTGTCAAGTTCACCTTATACAATGGATCAAATATTTTCAACTGGAATTCTTGCAATTTAA | 756 | 0.3823 | MLRKRPSPMIGKISELLVSGGRIMDTTGSPRGPLDTKMQSPRGLKNYHDLGGVGLKIVVALDNNKSCEVGREILPKHAVCTSNLNRSRPIQVQSVKNPNGFHKDYSSLNEIDMGSLEEYTYVTCHVPNKTFTKVYYDGGEGDVRIQHDYNFNNNVGVLRRSSQPQILIEPEPLFPTSNFLKSCHLCGKELQGKDIYMYRGEKGFCSTECRSNQIMMDERKERCGSEASRSGELSSSPYTMDQIFSTGILAI | 251 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car07g00387 | 251 | PANTHER | OS02G0174800 PROTEIN | 1 | 251 | IPR044604 | - | |
| Car07g00387 | 251 | Pfam | zinc-finger of the FCS-type, C2-C2 | 174 | 220 | IPR007650 | - | |
| Car07g00387 | 251 | ProSiteProfiles | Zinc finger FLZ-type profile. | 178 | 221 | IPR007650 | - | |
| Car07g00387 | 251 | MobiDBLite | consensus disorder prediction | 22 | 42 | - | - | |
| Car07g00387 | 251 | PANTHER | DUF581 FAMILY PROTEIN | 1 | 251 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Car07g00387 | Car-Chr7 | 3396641 | 3398156 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car07g00387 | - | - | gmx:100816402 | 331.257 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Car07g00387 | 07 | 3396641 | 3398156 | Car07g00387 | 07 | 3396641 | 3398156 | ECH | |
| Car07g00387 | 07 | 3396641 | 3398156 | Car01g01275 | 01 | 16988643 | 16989761 | PCT |