Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00291 ATGGGAACGTTCCAAACATTTAGAAAGGCCTACGGAGCTCTTAAAGATTCCACCAAGGTTGGCCTAGCCAAGGTCAATAGCGAATACAAGGAATTGGACATTGCAATTGTAAAAGCTACCAGTCACGTTGAATATCCTCCAAAAGAACGTCACGTTCGGAAAATATTCTATGCAACATCAGCACAGCAACCACGAGCAGATGTAGCTTATTGCATACACGCACTTTCCAAGAGACTTTCGAAGACGCGAAATTGGATAGTTGCCATAAAGACATTGATAGTGATTCATAGGATATTGAGAGAAGGTGATCCTAGTTTCAAAGAAGACCTTGTAAACTACTCACGCAGGGTACATTTTCTCCAAATATCTAACTTCAAAGATGACTCAAGTCCTCTAGCTTGGGATTGTTCTGCATGGGTTCGAACCTATGCACAATTTTTAGAAGAAAGACTTGAATGTTTTAGAATTCTTAAATATGACATTGAGTTTGAGCGTTTAACAAAAGCATCACCAGCTTCAACTAAGGTACATAGCAGAACAAGGATGTTGACCAGTGATGGGTTGTTGGAGCAGCTGCCTGCATTGCAGCAACTTCTTTACCGACTTGTTTGCTGTCAGCCTGAAGGATCAGCTTTCAACAATTATCTAATACAATATGCATTGGCCCTGGTATTGAAAGAAAGCTTTAAAATATATTGTGCCCTCAATGATGGAATCATAAAACTTGTTGACGAGTTCTTTGATATGACGAGATACGACGCGATAAAGGGTTTGCTTATTTATAAAAGAGCTGGCAAACAGGCTGAAAATCTTGCTGATTTCTATGAATACTGCAAGGGCTTGGACCTTGCTAGGAATTTTCAATTTCCAATTCTGAGACAGCCACCACCCTCTTTTGTTGCCACAATGGAAGAATACATTAAAGAAGCACCTCCAACAGGCAATGTTAAGAGACTGGAGTATCAAGAAAATGATCAATCACCAAAGAAAGAACCAGAAGAAAAAGAAACTGAAAAGCCTGAAGCAATTGAGAAAGAAGCTGAAGAAGTCAAGGAGGAAGAACCTACTGATAAGGATCAAACAGAGGAGGCTGAACTTCCTCCTCTGATATCAACTGATGATGATACTGATGATTTGCTGGGTCTAAATGAAATAAATCCAAAAGCTCAAGAACTAGAAGAAAGCAATGCTTTGGCTCTAGCAATTCTACCACCTGGCGGGAGAAAATTGAACAATCTTGCTTTGACTAATATAAGTGGAGCTTCTGGTTGGGAACTTGCACTTGTTACAACACCAAGCAAACACACGAGCGAAGCGCCAGATCGCAAAATGGCTGGTGGATTTGACAAGCTATTGCTAGACAGTTTGTATGAAGATGAAAATGCCAGAAGACAACTTCAACTCCAAAATGCGGGTTATGGATATGGAGGAGGGATGGCTATAAATAATCCATTTGATAATTATAATAATCAGCAACAAGATCCATTTGCAATATCCAACAATGTAGCACCTCCATCTAATGTACAAATGGCATTAATGGCTCAACAACAAATGATGTTccaacaacaacaacaacaacaaatgatgttccaacaacaacaacaacaaatgatgttccaacaacagcagcaacaacaatacaacatgatgatggttccttaccagcagcagcaacattcacaaGCTCATTACCCTCAACAGATGTCAGTTATGGGTTCTTCTAATCCATTCGGAGATCCTTTACCTGTACCTAGCTATTCTTATAGTTCCATGCACCATCAAGGGAACTACAATATAATGTAG 1803 0.3699 MGTFQTFRKAYGALKDSTKVGLAKVNSEYKELDIAIVKATSHVEYPPKERHVRKIFYATSAQQPRADVAYCIHALSKRLSKTRNWIVAIKTLIVIHRILREGDPSFKEDLVNYSRRVHFLQISNFKDDSSPLAWDCSAWVRTYAQFLEERLECFRILKYDIEFERLTKASPASTKVHSRTRMLTSDGLLEQLPALQQLLYRLVCCQPEGSAFNNYLIQYALALVLKESFKIYCALNDGIIKLVDEFFDMTRYDAIKGLLIYKRAGKQAENLADFYEYCKGLDLARNFQFPILRQPPPSFVATMEEYIKEAPPTGNVKRLEYQENDQSPKKEPEEKETEKPEAIEKEAEEVKEEEPTDKDQTEEAELPPLISTDDDTDDLLGLNEINPKAQELEESNALALAILPPGGRKLNNLALTNISGASGWELALVTTPSKHTSEAPDRKMAGGFDKLLLDSLYEDENARRQLQLQNAGYGYGGGMAINNPFDNYNNQQQDPFAISNNVAPPSNVQMALMAQQQMMFQQQQQQQMMFQQQQQQMMFQQQQQQQYNMMMVPYQQQQHSQAHYPQQMSVMGSSNPFGDPLPVPSYSYSSMHHQGNYNIM 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00291 600 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Car07g00291 600 SMART enth_2 30 161 IPR013809 -
Car07g00291 600 SUPERFAMILY GAT-like domain 178 309 - -
Car07g00291 600 SUPERFAMILY ENTH/VHS domain 31 161 IPR008942 -
Car07g00291 600 Pfam ANTH domain 31 309 IPR011417 GO:0005543
Car07g00291 600 Gene3D - 6 162 IPR008942 -
Car07g00291 600 Gene3D ANTH domain 173 326 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Car07g00291 600 MobiDBLite consensus disorder prediction 311 378 - -
Car07g00291 600 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 530 IPR045192 GO:0048268|GO:0072583
Car07g00291 600 MobiDBLite consensus disorder prediction 322 354 - -
Car07g00291 600 CDD ANTH_N 32 154 - -
Car07g00291 600 PANTHER CLATHRIN ASSEMBLY PLANT-LIKE PROTEIN 1 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00291 Car-Chr7 2633152 2638350 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00291 K20044 - gmx:100818165 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00291 07 2633152 2638350 Car01g01148 01 11873254 11878555 PCT