Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03832 ATGCCGGCTTTAGCTTGTTGCGTCGACGGTGCCGCTGCACTCCTTCCTCCCGGCTACGCACTTGCCGGAGACACAACTCTTCCGCCGCCGTTCACATTTTCTGCTGTGACAATAACCACCGACGATGCCTCCGCCGCTGTTGAGGAAACCAATTGGTCTCCTTCTCTTTCAACCAAATTATTCAAAATCGACGGCTGGGGTTTTCCTTACTTCGGCGTGAATAACGCCGGAGATATCTCCGTTCGGCCACACGGTACGGCGACGATGTCTCACCAGGAGATTGATTTGCTCAAAGTTGTGAAGAAAGCCTCCGATCCGAAATGCTGTGGCGGACTCGGGTTGCAGCTTCCTCTCGTTGTTCGGTTTCCTGATGTTTTAAAGAATCGTCTCGAGTCTCTTCACGCTGCCTTCGACGGTGCGATTCAATCTCAAGGGTATGAATCTCATTACCAAGGTGTTTACCCTGTGAAGTGTAACCAGGACCGGTTCGTTGTGGAGGACATTGTTGAATTCGGGTCACCGTTCCGGTTCGGGTTAGAAGCTGGTTCGAAACCCGAATTGCTTTTGGCTATGAGCTGTTTGTGTAAAGGAAACAGAGAAGCCTTTTTGGTTTGCAACGGTTTCAAAGACAGTGAATATATTACTCTGGCTTTGGTTGCGAGGAAGCTGGCTTTGAACACTGTTATTGTTCTTGAGCAAGAGGAAGAGCTTGACATGGTGATTGATATCAGCAAAAAGCTTTGCATTCGTCCCGTGATTGGTGTTCGCGCGAAGTTGAGGACCAAACATTCTGGCCATTTCGGTTCGACTTCAGGTGATAAAGGTAAATTTGGTTTAACAACAATTCAGATTTTGCGTGTGGTGAAGAAGCTTGAACAATTAGATATGCTTGATTGTCTCCAACTGTTGCATTTTCATATTGGCTCTCAAATTCCCACCACTGAATTGCTTGCTGATGGTGTTGGAGAAGCTGCTCAGATCTATTGTGAGTTGCTTCGTTTGGGTGCCCAGATGCGAGTTTTAGACATTGGTGGTGGTTTGGGCATAGATTATGATGGTTCAAAGTCGAGCGATTCTGATCTATCTGTTGCTTATGGTTTAGAAGAGTATGCTGCAGCTGTTGTTAATGCTGTGAAATATGTATGCGATCGTAGGGGTTTTAAGCACCCTGTGATTTGCAGTGAGAGTGGTAGGGCCATTGTGTCTCATCATTCAATTTTGATTTTTGAGGCTATTGGTTCAACTTCACACTGTACCCCTTCATTGTCCTCCATTGGATTGCAGTATTTGGGAGAAGGGCTCTCTGAGGAAACACTTGCTGATTATCAGAACATATCTGCTGCTACCATTCGTGGTGATCATGAAGCCTGTTTGCTCTACACTGAGCAATTCAAGAAAGGGTGTGTTGAGCAATTCAAGCAAGGGACTTTAGGGATTGAACAGCTAGCTGCAGTGGATGGTTTGTGTGATTTGATAACGGAGACGATTGGGGCAAAGGATCCAGTTAAATCATACAATGTGAATCTCTCTGTTTTCACATCCATTCCTGATTTTTGGGGCATAGAGCAATTGTTTCCAATTGTCCCAATTCATCGTCTGGATGAGAAACCAACTGCTAGGGGTATTTTATCTGACTTAACTTGTGACAGTGATGGGAAGATAAACAAGTTCATTGGTGGTGAGTCAAGCTTGCCACTTCATGAATTGGAAGGACAAAATGGTGGAGGATACTATCTGGGAATGTTCTTGGGCGGGGCTTATGAGGAGGCGCTTGGTGGGTTCCACAACCTGTTTGGTGGCCCTAGTGTTGTTAGGGTGTTACAGAGCGACGGTCCACACGGTTTTGCGGTGACGCGGGCTGTTTCTGGACCGTCGTGTGCAGATGTCCTCCGAGTGATGCAGCACGAGCCGCAGCTCATGTTTGAGACGCTCAAGCACCGTGTACTTGAATTTTGTGGACAGCATGATGATGATAGTGTGGTGAATGCAGCAGGGCTGGCAAATAGTCTAGCTAGATCATTTGATAACATGCCTTATTTGGTTTCATCATCCTCTTGTTGTTTGAATGCTGTTACTAACAATGAGGGATTTTACTATTGTTCTGGCGATGATTTCAGTGCAGATTCTGCTTCTGCTGTTACCTCTGTTGCTGGTTCCGTTGCCGGAGAAGATGAGCATTGGTCATATTGCTGTGCTTGA 2199 0.4625 MPALACCVDGAAALLPPGYALAGDTTLPPPFTFSAVTITTDDASAAVEETNWSPSLSTKLFKIDGWGFPYFGVNNAGDISVRPHGTATMSHQEIDLLKVVKKASDPKCCGGLGLQLPLVVRFPDVLKNRLESLHAAFDGAIQSQGYESHYQGVYPVKCNQDRFVVEDIVEFGSPFRFGLEAGSKPELLLAMSCLCKGNREAFLVCNGFKDSEYITLALVARKLALNTVIVLEQEEELDMVIDISKKLCIRPVIGVRAKLRTKHSGHFGSTSGDKGKFGLTTIQILRVVKKLEQLDMLDCLQLLHFHIGSQIPTTELLADGVGEAAQIYCELLRLGAQMRVLDIGGGLGIDYDGSKSSDSDLSVAYGLEEYAAAVVNAVKYVCDRRGFKHPVICSESGRAIVSHHSILIFEAIGSTSHCTPSLSSIGLQYLGEGLSEETLADYQNISAATIRGDHEACLLYTEQFKKGCVEQFKQGTLGIEQLAAVDGLCDLITETIGAKDPVKSYNVNLSVFTSIPDFWGIEQLFPIVPIHRLDEKPTARGILSDLTCDSDGKINKFIGGESSLPLHELEGQNGGGYYLGMFLGGAYEEALGGFHNLFGGPSVVRVLQSDGPHGFAVTRAVSGPSCADVLRVMQHEPQLMFETLKHRVLEFCGQHDDDSVVNAAGLANSLARSFDNMPYLVSSSSCCLNAVTNNEGFYYCSGDDFSADSASAVTSVAGSVAGEDEHWSYCCA 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03832 732 SUPERFAMILY Alanine racemase C-terminal domain-like 486 609 IPR009006 GO:0003824
Car06g03832 732 CDD PLPDE_III_ADC 113 606 IPR002985 GO:0006527|GO:0008295|GO:0008792
Car06g03832 732 PRINTS Arginine decarboxylase signature 122 137 IPR002985 GO:0006527|GO:0008295|GO:0008792
Car06g03832 732 PRINTS Arginine decarboxylase signature 146 160 IPR002985 GO:0006527|GO:0008295|GO:0008792
Car06g03832 732 PRINTS Arginine decarboxylase signature 204 219 IPR002985 GO:0006527|GO:0008295|GO:0008792
Car06g03832 732 PRINTS Arginine decarboxylase signature 230 251 IPR002985 GO:0006527|GO:0008295|GO:0008792
Car06g03832 732 PRINTS Arginine decarboxylase signature 254 276 IPR002985 GO:0006527|GO:0008295|GO:0008792
Car06g03832 732 PRINTS Arginine decarboxylase signature 382 399 IPR002985 GO:0006527|GO:0008295|GO:0008792
Car06g03832 732 PRINTS Arginine decarboxylase signature 508 529 IPR002985 GO:0006527|GO:0008295|GO:0008792
Car06g03832 732 PRINTS Arginine decarboxylase signature 533 558 IPR002985 GO:0006527|GO:0008295|GO:0008792
Car06g03832 732 PRINTS Arginine decarboxylase signature 585 606 IPR002985 GO:0006527|GO:0008295|GO:0008792
Car06g03832 732 SUPERFAMILY PLP-binding barrel 122 404 IPR029066 -
Car06g03832 732 PIRSF ARGDC 37 683 IPR002985 GO:0006527|GO:0008295|GO:0008792
Car06g03832 732 TIGRFAM speA: arginine decarboxylase 52 680 IPR002985 GO:0006527|GO:0008295|GO:0008792
Car06g03832 732 Gene3D Lyase, Ornithine Decarboxylase; Chain A, domain 1 61 607 IPR009006 GO:0003824
Car06g03832 732 ProSitePatterns Orn/DAP/Arg decarboxylases family 2 signature 2. 335 348 IPR022657 -
Car06g03832 732 Gene3D Alanine racemase 123 404 IPR029066 -
Car06g03832 732 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 154 172 IPR000183 GO:0003824
Car06g03832 732 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 178 190 IPR000183 GO:0003824
Car06g03832 732 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 297 310 IPR000183 GO:0003824
Car06g03832 732 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 392 411 IPR000183 GO:0003824
Car06g03832 732 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 585 598 IPR000183 GO:0003824
Car06g03832 732 ProSitePatterns Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 154 172 IPR022653 -
Car06g03832 732 Gene3D - 421 501 - -
Car06g03832 732 PANTHER ARGININE DECARBOXYLASE 1 732 - -
Car06g03832 732 PANTHER ARGININE DECARBOXYLASE 1 732 IPR002985 GO:0006527|GO:0008295|GO:0008792
Car06g03832 732 Pfam Pyridoxal-dependent decarboxylase, pyridoxal binding domain 149 402 IPR022644 GO:0003824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03832 K01583 - twl:119992284 1063.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03832 06 70024077 70027084 Car06g03832 06 70024077 70027084 ECH