Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03830 ATGGCCTCAGCATCAGCATCTTTTCTCAAGTCATCACCTGTTCTTGACAAGTCTGAATGGGTGAAGGGACAAACCCTCCTCCGTCAACCTTCTATGTCCGTCGTAAGATGCAACCCCGCCGCTCCATCAAGTCTCACCATCAGAGCTGGTTCCTATTCTGACGAGCTCGTCAAGACCGCGAAAACAattgcttccccggggcgtggtattttggctatggatgaatccaatgctacatgcggaaagcgtttggcttcaattgggttagagaacaccgaagttaatcgccaagcatggcgtactcttctggtgacagttccaacacttggacagtacatctctggtgctattctatttgaggagactctctaccaATCCACAACTGATGGAAGGAAGATCGTTGATGTACTTACGGAGCAAAACATTGTTCCTGGTATCAAAGTTGACAAGGGTCTGGTGCCCCTAGCTGGTTCGAATGATGAGTCATGGTGCCAAGGTCTAGATGGTCTTGCCTCTCGCTCAGCTGCATACTACCAGCAAGGTGCCCGTTTCGCTAAATGGCGTACTGTTGTGAGCATCCCCAACGGTCCCTCTGCTCTGGCTGTCAAGGAAGCAGCATGGGGTCTGGCTCGCTATGCTGCTATTAGTCAGGACAACGGGTTGGTCCCAATTGTGGAACCAGAGATCTTGCTTGATGGAGAACACAGTATTGACAGGACTTATGAAGTAGCCCAAAAGGTTTGGGCTGAGGTTTTCTTCTACCTTGCTGAGAACAATGTCGAGTTTGAAGGTATTCTCCTCAAACCTAGCATGGTTACTCCTGGAGCTGAGAGCAAGGACAAGGCCTCTCCTACACAGGTTGCTGAGTATACTCTCAACCTCCTTCGCAGGAGAATTCCCCCTTCTGTCCCTGGTATCATGTTTTTGTCTGGTGGACAATCTGAGGTTGAAGCAACTCTGAACTTGAATGCCATGAACCAATCTCCAAACCCATGGCACGTATCATTCTCATATGCAAGAGCTCTTCAAAACACCGCATTGAAGACATGGGGAGGCCGTGCAGAGAACGTGACGGCAGCACAAGAAGCGCTTCTCTTCCGCGCCAAGTCGAACTCCATTGCTCAGCTTGGAAAGTACACTGGTGAAGGTGAATCTGAGGAAGCCAAGAAGGAATTGTTTGTGAAAGGGTACTCCTATTAA 1200 0.4167 MASASASFLKSSPVLDKSEWVKGQTLLRQPSMSVVRCNPAAPSSLTIRAGSYSDELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEVNRQAWRTLLVTVPTLGQYISGAILFEETLYQSTTDGRKIVDVLTEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHSIDRTYEVAQKVWAEVFFYLAENNVEFEGILLKPSMVTPGAESKDKASPTQVAEYTLNLLRRRIPPSVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTALKTWGGRAENVTAAQEALLFRAKSNSIAQLGKYTGEGESEEAKKELFVKGYSY 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03830 399 CDD FBP_aldolase_I_a 53 379 - -
Car06g03830 399 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 27 399 IPR000741 GO:0004332|GO:0006096
Car06g03830 399 SUPERFAMILY Aldolase 45 399 - -
Car06g03830 399 Pfam Fructose-bisphosphate aldolase class-I 55 399 IPR000741 GO:0004332|GO:0006096
Car06g03830 399 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 27 399 - -
Car06g03830 399 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 260 270 IPR029768 -
Car06g03830 399 Gene3D Aldolase class I 36 398 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03830 Car-Chr6 69987325 69991416 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03830 52 399 Miscellaneous Gene Families AT3G52930 55.398 4.83e-133 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03830 K01623 - gmx:100775844 725.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03830 06 69987325 69991416 Car06g03830 06 69987325 69991416 ECH