Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03818 ATGGCTACTTCCTCCACACTTGAAACTTGTTTAAACGCTCAAGCTCCTGAGTTCTTCCCTAACAAACTCAACAAACTTCAACCTCCTCATAACTACCACTACGCTCCTTTTCCTCGACAACCTCATTTTTACTTTTACCCCACCAACACTAAACATGCTTTTCATCCATCTTCTTTTTACTTCCACTTTCACCCTAACCACACTTTTCCTTTCTCACAATCACAACATAAACTCTCTCCTTTTCACCACTCTGCTGCTTTGGAAAAACAAGAGCTGAAAAAGGATGTGGTTGTGGAACGTCGTCGTTCTGATCATGGGTTGAGATTCCATGGTTATGAGTGTGGGAGGAAGGGATTGAAAAATGTTGCTGAAAAGGATAAGAAATTTGATCATCGTTTGAGAAAGAATCACCATTATGGAAGAAATGTTGGTGACACTTACTTTAGGGCTTTTCATGATCATCATAAGAATAATCGAAATTTTCCTGTGGTCCCCGTGCGTCCTGATGGAAATCAAACAACTGTTATGATCAAAAACATTCCTAGCAAGTATACTCGAGATATGTTGGTGATGTACTTGGAGAATCATTGCATGGTGGAAAATGCTAAAGAGGAAGAGAATGGAGAAGAAAACACGTTTGCCTTTGATTTCGTTTATTTGCCAATAGATTTCAGAAGCGGGTTGAATAAGGGATATGCGTTTGTGAATTTTACAAAGGCAACGGCAGCATGGAAATTTCTGTTGACAGCATCGGATAGGAAATGGGAGTTGTTTCTTTCCCGCAAAATACGTCAAGTTGTTGCCGCACGCTTACAGGGTAAGGAGAAACTGGAGAGTCATTTTGAGAGCATGAATTTTCCTTGTTCATCTGACGATGTTTTGCCAGTTTCTTTCAGTCCACCTCGGGATGGTGTAACCAAAGGAAATCAAAAGACAATGGGGAAACTTCTTTTCAAGCCAACTACTACACACTCTAACTATTATTAG 987 0.4012 MATSSTLETCLNAQAPEFFPNKLNKLQPPHNYHYAPFPRQPHFYFYPTNTKHAFHPSSFYFHFHPNHTFPFSQSQHKLSPFHHSAALEKQELKKDVVVERRRSDHGLRFHGYECGRKGLKNVAEKDKKFDHRLRKNHHYGRNVGDTYFRAFHDHHKNNRNFPVVPVRPDGNQTTVMIKNIPSKYTRDMLVMYLENHCMVENAKEEENGEENTFAFDFVYLPIDFRSGLNKGYAFVNFTKATAAWKFLLTASDRKWELFLSRKIRQVVAARLQGKEKLESHFESMNFPCSSDDVLPVSFSPPRDGVTKGNQKTMGKLLFKPTTTHSNYY 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03818 328 Pfam RNA recognition motif 2 173 281 IPR007201 -
Car06g03818 328 Gene3D - 89 277 IPR012677 -
Car06g03818 328 PANTHER RNA BINDING PROTEIN 28 312 - -
Car06g03818 328 PANTHER MEI2 C-TERMINAL RRM ONLY LIKE 1 28 312 - -
Car06g03818 328 SUPERFAMILY RNA-binding domain, RBD 155 253 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03818 Car-Chr6 69864759 69866124 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03818 - - mtr:MTR_4g071310 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03818 06 69864759 69866124 Car06g03818 06 69864759 69866124 ECH