Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03816 ATGGCCTCTTCCTCACGAGCAAGGAGCAACTCGCCATTTTCGCACCGAAAACCGGCCACTCCTCACTCCACCGCTTCATCCTCTTATTCTTCCTTTACTGCCGCAAAGTTAATGCCACGCTCCTGCTCTTCTTCCGCCTCTTCTTTTTTCAATTCCGGTGGCGGTGAACTCAGTGGCCGATCCATTAATCCGAGTACTGGTCGCAGCGAGTCAACTTATTACGACGCGCACGGTTATTCTTCTCCGGCGGAGGAAGTAATCGCGGAGCCTGTGGATTCTTCTTCTCGGGATAGCATTTCGGTGACGATTCGGTTTAGACCGTTGAGTGGAAGAGAGTACCAGAGAGGAGACGAGATCGCGTGGTATGCGGATGGTGATAAAATTGTGAGGAATCAGTATAATCCAGCTACTGCTTATGCATTCGACAGAGTGTTTGGACCGCATACAAATTCTGACGAGGTGTATGATGTAGCAGCCAAACCTGTGGTGAAGACAGCCATGGAAGGGGTCAATGGAACTGTGTTTGCTTACGGTGTGACGAGTAGTGGAAAAACACATACGATGCATGGAGATCAAAACTCTCCTGGTATCATACCACTGGCTATAAAAGATGTTTTCAGCATTATCCAAGATACTCCGGGAAGAGAGTTCTTACTTCGAGTGTCATATCTAGAAATATACAACGAGGTGATAAATGACTTGCTTGACCCAACTGGCCAAAATTTGCGTGTTAGAGAAGATGCACAGGGTACTTATGTGGAGGGTATAAAGGAAGAAGTTGTTTTGTCTCCTGGACACGCACTTTCCTTTATTGCTGCTGGCGAAGAACATCGTCATGTTGGATCAAACAATTTTAACCTCTTCAGCAGCCGTAGTCACACAATTTTTACACTTATGATTGAAAGCAGTGCACATGGTGAAGAATATGATGGAGTGATATTCTCTCAGCTTAATTTGATTGATCTGGCTGGATCTGAAAGCTCAAAAACTGAAACAACTGGATTAAGAAGAAAAGAAGGATCATATATAAACAAAAGTCTTCTGACCCTTGGAACTGTTATTGGAAAGCTGAGCGAGGGGAAAGCATCTCACGTTCCGTACCGAGATTCAAAGCTTACGCGCCTCCTGCAGTCTTCACTTAGTGGCCATGGTCATGTTTCACTTATATGCACTGTGACTCCAGCATCCAGTAATATGGAAGAAACTCATAATACCTTAAAGTTTGCAAGCAGAGCAAAGCGAGTAGAAATATATGCTTCACGTAATAAGATTATTGATGAAAAATCTTTAATTAAGAAATACCAGAGAGAAATTTCAGTTCTAAAAACTGAACTTGATCAACTGAAGAAGGGGTTGCAACTTGGTGTCAATAATGAAGAAATTTTGACCTTAAAGCAAAAGTTAGAGGAAGGTCAAGTGAAAATGCAGTCAAGATTAGAAGAAGAGGAAGAAGCGAAGGTTGCTCTTGCAAGTAGGATCCAGAAGTTAACCAAACTCATTCTGGTTTCATCAAAGAATGCAATTCCTGGATATCTAACTGATGCTCCTGGTCACCAGCGAAGTCACTCTGTTGGCGAGGATGATAAGTATGATGCCCTACAAGATGGTTCCCTTTTGTTTGAAAGCGAGAGCCAAAAAGATGTTCCCACTGTGTCATCTGATCTGTCTCATGATGTTAGACATAGAAGATCTTCAAGTCGACGGAACGAAGAGCTCTCCCCATCTAGCAGTATTATAACTGAATCAACACAAGCTGGTGAACTGATCAGCAGAACAAGGCTACCAGCAGGAGGGATGACAATGTCTGATCAGATGGATCTCCTTGTTGAGCAAGTCAAAATGCTTGCTGGAGACATTGCGTTCAGTACTAGCACTCTGAAGCGCTTGACAGAACAGTCTGTAAATGATCCTGAAAGCTCCAGAACTCAGATTGAGAACTTAGATCAAGAAATCCAAGAAAAAAGGAAGCAAATGAGGGTTTTAGAACAAAGAATAATTGAGACTGGTGAAACTTCGGTAGCTAACCCATCCCTGGTTGAAATGCAGCAGACTGTCACAAGATTGACGACTCAGTGTAATGAAAAAGCATTTGAGCTGGAGATAAAATCTGCCGACAACCGTGTCCTTCAAGAACAATTAAGTAGTAAGTGCTCTGAAAACAGAGAATTGCAAGAAAAGGTGAAGTTGCTAGAGCAGCAACTAGCAATAGTTACTAGTGGTACCTCGCTAGGGCTTACCGATCAGTGTGCGTCTGGAGAGCACATTGATGAGTTGAAAAGGAAAATACAGTCCCAGGAGATTGAAAATGAAAATCTGAAGCTAGAACAAGTACAATTGTCAGAAGAGAATAGTGGATTGCATGTGCAGAATCAGAAACTCTCTGAAGAAGCATCTTATGCCAAAGAACTGGCCTCTGCTGCTGCTGTGGAATTGAAAAATTTGGCTGGGGAGGTGACAAAACTTTCATTGCAGAATGCAAAGTTGGAAAAAGAGTTTAGGGCTGCTCGAGACCTGGCCAACAGTCGAAGTGCTGTCGTACCAACAGTTAATGGTGTTCACCGCAAGTACAATGATGCAAGATCTGGAAGGAAGGGTAGAATTTCTAGCCGTGCAAATGAAAATTTTGGACCTGGTATAGATGAGTTGGAGTCATGGAATCTCGAAGTTGATGATCTGAAGATGGAACTTCAGGCTAGGAAACAACGAGAGGCAGTTCTTGAGGCTGCATTGTCTGAAAAGGAAATGATGGAAGAGGAATACAGGAAAAGGGTTGAAGAGGCTAAGAAAAGAGAATCCTCGTTGGAGAATGATTTAGCAAATATGTGGGTCCTTGTCGCGAAGTTAAAGAAAGAAGTGGGTGTTGTCACAGAATCAAACATTGACAAAAAAATTGGAGATGGGGAAGCACATACGAATGATCCGAAAACTAATGACATAGAAAGTGATATTATCTCTAAGGAGCAGGCATTGGATGTATCAAAACCAGACAATGAAACTCCCAAGGAAGAACCTTTGGTTGTTCGTCTCAAGGCACGAATGCAAGATATGAAGGAAAAAGAACTCAAGCATCTTGGTAACGGAGATGCCAATTCTCATGTTTGTAAAGTGTGCTTTGAATCGTCAACTGCAGCAATTCTTCTTCCATGCCGTCATTTTTGTTTGTGTAAATCTTGTTCACTTGCATGTTCTGAATGTCCAATATGCAGAACAAATATCGCAGATAGACTTTTTGCTTTTACATCTTGA 3246 0.4245 MASSSRARSNSPFSHRKPATPHSTASSSYSSFTAAKLMPRSCSSSASSFFNSGGGELSGRSINPSTGRSESTYYDAHGYSSPAEEVIAEPVDSSSRDSISVTIRFRPLSGREYQRGDEIAWYADGDKIVRNQYNPATAYAFDRVFGPHTNSDEVYDVAAKPVVKTAMEGVNGTVFAYGVTSSGKTHTMHGDQNSPGIIPLAIKDVFSIIQDTPGREFLLRVSYLEIYNEVINDLLDPTGQNLRVREDAQGTYVEGIKEEVVLSPGHALSFIAAGEEHRHVGSNNFNLFSSRSHTIFTLMIESSAHGEEYDGVIFSQLNLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVIGKLSEGKASHVPYRDSKLTRLLQSSLSGHGHVSLICTVTPASSNMEETHNTLKFASRAKRVEIYASRNKIIDEKSLIKKYQREISVLKTELDQLKKGLQLGVNNEEILTLKQKLEEGQVKMQSRLEEEEEAKVALASRIQKLTKLILVSSKNAIPGYLTDAPGHQRSHSVGEDDKYDALQDGSLLFESESQKDVPTVSSDLSHDVRHRRSSSRRNEELSPSSSIITESTQAGELISRTRLPAGGMTMSDQMDLLVEQVKMLAGDIAFSTSTLKRLTEQSVNDPESSRTQIENLDQEIQEKRKQMRVLEQRIIETGETSVANPSLVEMQQTVTRLTTQCNEKAFELEIKSADNRVLQEQLSSKCSENRELQEKVKLLEQQLAIVTSGTSLGLTDQCASGEHIDELKRKIQSQEIENENLKLEQVQLSEENSGLHVQNQKLSEEASYAKELASAAAVELKNLAGEVTKLSLQNAKLEKEFRAARDLANSRSAVVPTVNGVHRKYNDARSGRKGRISSRANENFGPGIDELESWNLEVDDLKMELQARKQREAVLEAALSEKEMMEEEYRKRVEEAKKRESSLENDLANMWVLVAKLKKEVGVVTESNIDKKIGDGEAHTNDPKTNDIESDIISKEQALDVSKPDNETPKEEPLVVRLKARMQDMKEKELKHLGNGDANSHVCKVCFESSTAAILLPCRHFCLCKSCSLACSECPICRTNIADRLFAFTS 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03816 1081 Coils Coil 644 664 - -
Car06g03816 1081 CDD KISc_CENP_E 98 415 - -
Car06g03816 1081 Coils Coil 706 740 - -
Car06g03816 1081 MobiDBLite consensus disorder prediction 541 584 - -
Car06g03816 1081 Coils Coil 811 838 - -
Car06g03816 1081 ProSiteProfiles Zinc finger RING-type profile. 1034 1069 IPR001841 -
Car06g03816 1081 Coils Coil 755 782 - -
Car06g03816 1081 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 98 452 IPR027417 -
Car06g03816 1081 SUPERFAMILY RING/U-box 1033 1073 - -
Car06g03816 1081 ProSitePatterns Kinesin motor domain signature. 315 326 IPR019821 GO:0003777|GO:0005524|GO:0007018
Car06g03816 1081 Coils Coil 424 451 - -
Car06g03816 1081 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1008 1078 IPR013083 -
Car06g03816 1081 MobiDBLite consensus disorder prediction 42 75 - -
Car06g03816 1081 PANTHER KINESIN-LIKE PROTEIN KIN-7D, MITOCHONDRIAL 59 1042 - -
Car06g03816 1081 Coils Coil 882 937 - -
Car06g03816 1081 Gene3D Kinesin motor domain 89 446 IPR036961 -
Car06g03816 1081 MobiDBLite consensus disorder prediction 1 30 - -
Car06g03816 1081 Pfam Kinesin motor domain 104 415 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car06g03816 1081 ProSiteProfiles Kinesin motor domain profile. 98 415 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car06g03816 1081 Pfam Zinc finger, C3HC4 type (RING finger) 1032 1073 - -
Car06g03816 1081 MobiDBLite consensus disorder prediction 553 569 - -
Car06g03816 1081 MobiDBLite consensus disorder prediction 570 584 - -
Car06g03816 1081 PRINTS Kinesin heavy chain signature 169 190 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car06g03816 1081 PRINTS Kinesin heavy chain signature 283 300 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car06g03816 1081 PRINTS Kinesin heavy chain signature 316 334 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car06g03816 1081 PRINTS Kinesin heavy chain signature 365 386 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car06g03816 1081 Coils Coil 465 499 - -
Car06g03816 1081 PANTHER CENTROMERE PROTEIN E 59 1042 - -
Car06g03816 1081 SMART kinesin_4 96 423 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03816 Car-Chr6 69821473 69833315 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03816 36 1081 Miscellaneous Gene Families AT4G39050 70.943 0.0 1461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03816 K11498 - gmx:100800460 1690.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03816 06 69821473 69833315 Car06g03816 06 69821473 69833315 ECH