Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03801 ATGCTTGTGCTGTTTGAAACGCCCGCTGGGTTTGCAATTTTCAAAGTTCTTGATGAAGGAAAGCTTTCAAAAGTTGAGGACTTATCCAATGAGTTTGCCACTGCAGATGCTGCTAGAAAGGTGGTCAAATTGAAAGCATTTTCCAAGTTTGAGAATACTTCGGAAGCTCTAGAGGCAGCTACTTTGCTGATTGATGGAAAAGCTAGCAAGGGTTTACGCAAGTTTCTTCGTGCTCATTGTGATAATGAAACATTGGGTGTTGCTGATTCCAAACTTGGGAATATCATTAAGGAGAAATTGAAAATTGACTGTGTTCACAACAATGCTGTTATGGAGTTGATGCGAGGTGTTAGATATCAATTGAATGAACTCATATCAGGTCTTGCTGTACAAGACATGGCTCCAATGAGCTTGGGTTTGTCTCATAGCTTATCCAGATACAAGCTGAAGTTCAGTGCCGAGAAGGTTGATACCATGATCGTCCAGGCTATTGGTTTACTAGATGATCTTGATAAAGAGCTGAACACTTATGCTATGAGGGTTCGTGAGTGGTATGGTTGGCATTTCCCAGAACTTACCAAAATCATACAAGACAATATCCAATATGCAAAAGCTGTTAAGTTGATGGGTGACCGCACTAATGCTGCAAAGCTTGATTTCTCTGAGATTCTGGCAGATGAAGTTGAGGCAGAATTGAAAGAAGCATGTGTGATATCTATGGGAACTGAAATTGGTGAGCTTGACTTGGCAAATATTAGAGAGCTCTGTGATCAGGTGTTGTCCCTTTCTGAGTACAGGGCTCAACTTTATGATTATCTCAAGAGTAGGATGAACACCATTGCACCCAATTTGACTGCTATGGTTGGAGAGCTTGTTGGTGCTCGTCTCATTGCTCATGGGGGTAGCTTAATAAATCTTGCAAAGCAGCCAGGTAGTACTGTGCAGATTCTTGGTGCTGAGAAGGCTCTCTTTAGGGCACTGAAGACTAAGCATGCTACTCCAAAGTATGGTCTCATATACCATGCATCCTTGATTGGTCAGGCTGCTCCAAAGTTCAAAGGGAAAATTTCTCGGTCACTTGCTGCGAAGACTGCTTTGGCTATCAGGTGTGATGCACTGGGAGATGGGCAAGATAACACCATGGGACTGGAGAACAGAGCCAAGCTTGAAGCACGATTAAGGGCACTAGAAGGCAAAGAACTAGGTCGCTTTGCCGGTTCCGCTAAAGGGAAGCCTAAGATAGAAGCATATGACAAGGATCTTAAGAAAGGAGCTGGCGCACTGATTACTCAAGCAAAGACATATAATACTGCAGCTGATTCAGTTATTGACGTCAAATCTAAAACTGCAATGGAAGAAGATATACAAGAACCTGTCACTGAGAAAAAGAAGGAGAAGAAGGAAAAGAAAGAAAAGAAGAAAAAGGAGAAAAATGAAGAGGAGGATGCAACTTTGCCAGCTGTTGAGGAACCAGAGCCAGAAGTTGTGAAaaaggaaaagaaaaagaaaaggaaagaaTCTACTGAGGATGCAGAGTTGCAAAATGGAGACAGTAATTTGAATGGAGAAAAGAAGAAAAAGAGGAAGAAGTGTGAAGAACAAGAAGACTCTGCTGAAAAGCCaagcaaaaagaaagaaaaaaagaagaaaagaaCCGACTAG 1662 0.4091 MLVLFETPAGFAIFKVLDEGKLSKVEDLSNEFATADAARKVVKLKAFSKFENTSEALEAATLLIDGKASKGLRKFLRAHCDNETLGVADSKLGNIIKEKLKIDCVHNNAVMELMRGVRYQLNELISGLAVQDMAPMSLGLSHSLSRYKLKFSAEKVDTMIVQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIIQDNIQYAKAVKLMGDRTNAAKLDFSEILADEVEAELKEACVISMGTEIGELDLANIRELCDQVLSLSEYRAQLYDYLKSRMNTIAPNLTAMVGELVGARLIAHGGSLINLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLIGQAAPKFKGKISRSLAAKTALAIRCDALGDGQDNTMGLENRAKLEARLRALEGKELGRFAGSAKGKPKIEAYDKDLKKGAGALITQAKTYNTAADSVIDVKSKTAMEEDIQEPVTEKKKEKKEKKEKKKKEKNEEEDATLPAVEEPEPEVVKKEKKKKRKESTEDAELQNGDSNLNGEKKKKRKKCEEQEDSAEKPSKKKEKKKKRTD 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03801 553 ProSiteProfiles Nop domain profile. 280 398 IPR002687 -
Car06g03801 553 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 1 551 IPR045056 GO:0030515|GO:0031428|GO:0032040
Car06g03801 553 Coils Coil 459 484 - -
Car06g03801 553 MobiDBLite consensus disorder prediction 519 543 - -
Car06g03801 553 PANTHER NUCLEOLAR PROTEIN 58 1 551 - -
Car06g03801 553 Pfam NOP5NT (NUC127) domain 2 66 IPR012974 -
Car06g03801 553 SMART NOSIC_2 159 211 IPR012976 -
Car06g03801 553 Gene3D - 129 284 - -
Car06g03801 553 Gene3D Nop domain 285 397 IPR042239 -
Car06g03801 553 SUPERFAMILY Nop domain 153 397 IPR036070 -
Car06g03801 553 Pfam snoRNA binding domain, fibrillarin 166 394 IPR002687 -
Car06g03801 553 MobiDBLite consensus disorder prediction 451 484 - -
Car06g03801 553 MobiDBLite consensus disorder prediction 451 553 - -
Car06g03801 553 MobiDBLite consensus disorder prediction 491 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03801 Car-Chr6 69714926 69719196 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03801 K14565 - gmx:100784721 855.899