Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03780 ATGGGGAAGGCGAAGGCTAAAGGTAAGCATCGTTTGGACAAATACTACCACTTAGCCAAAGAACACGGTTACAGATCACGAGCCTCATGGAAACTCGTTCAACTCAACTCAAAATTCCACTTTCTCGAATCTGCACGCGCCGTTCTCGATCTCTGCGCCGCTCCCGGAGGTTGGATGCAGGTTGCGGTCCAGCGCGTCCCCGTCGACCATCTCGTCATTGGAGTTGACCTTGCGCCTATTGCTCCCATTCGTGGTGCAATTGCAATACAGGAGGATATTACCAGACCTGAATGTAAGTCGCGAATTAAGAAACTGATGAATGAAAACGGTTATCGTGCTTTTGATGTTATTCTTCATGATGGTTCGCCGAATGTTGGTGGTGCTTGGGCTCAAGAAGCTACGAGTCAGAATGCTCTTGTTATTGACGCTGTTAAGTTGGCTACACAGTTTTTAGCACCGAAGGGTATTTTTGTCACCAAGATTTTTAGGTCGCAGGATTACAGTTCCGTTGTGTATTGTTTGAAGCAGTTGTTTGAGAAGGTTGAGGTGGATAAACCAGCTGCTAGTCGTTCTGAATCTGCTGAGATATATGTTTTGGGGCTTAAATATAAGGCACCTGCTAAGATTGACCCTCGTCTTCTCGATTTCAAGCATCTCTTTCAGGCATCTTCTCAACCCCAGGCCAAGGTGCTGGATGTGCTTAGGGACAATAAGCAAAAGAGGCATCGTGACGGTTATGAGGATGGAAACACAACATTGAGGAAGGTGTCTTCAGCTGCAAATTTTATTTGGTCAGATGCACCTCTGGAGATTCTTGGTTCAGTTACCTCTATATCCTTTACTGACCCAGCTGATTTACCAATCAAGGATCACAAGTTGACAACTGAAGAGGTAAACTCTCTCTGCGATGATTTGAGGGTTTTGGGGAAGCAAGATTTCAAGCATCTTCTAAAGTGGCGGATTAACATTAGAAAAGCTCTTTCACCTACTCAAAAGGCTGATCCTATCACTACAGCTGCAGTGGAAGATAAGCCTGAGATGGATGAAGATGATAGAATACTTAATGAAATGGAGGAACTGACAAATGCGTTGGACCGCAAGAAAAAACGTGAAAAAAAGATTTTGGCAAAAAGAAGAGCTAAGGAAACGGCACGAAAAGCAACAGGAATGCAAATGGATGCAGTAGAAGATGGTTATGTTGATCATGAGTTGTTTTCTCTTGCCTCTATGAAGGGTAAAAAGGATCTTGTTGCTGTTGACACCACTGAATATGAAGGTGGTGACGGTGAAGCGGATGACAGTGACAACGAAAAAATCAAAGATGGCTCAGAGCATTCATCCAGTGACTTAGATTCTGATGAAGAACGTCAAAGATACGATGAGCAAATGGAATATTTCCTTGAGCAAGCTTATGAGCGCTTTGTGATAAAAAAGGAAGGAGCTGCAAAGCAGCGTAAGCGTATTAAGAAATCATATGATGCAGACTCCCAACTTTTGGAGGGTGGTGAGGATGATACCATTATTCAGTCTAAATATGATTCCGAGGAAGAACAGGAGGTTCAAGAAGCAAATCCTTTGATGGTGGCACTTAATGATGGGGCAGGTCCCACCCAAGAAGAGATAAAAGATATGTGGTTTAGGCAAGATGTCTTCGCTGAAGCTGAAGAGGAAGAAGGCTTTGAGAAAGATGATAGTGGAAATGAAATGGATATTGATGGGCTGAAGGAGAAAACATCTGTTGCTGAAAAGATCAAAGAAAATAAAACGTCTGCCACTGTGCAGATAGATCATACCCGATCTCAAGCAGCAATGGAAGAGGATTTTGAGATTGTACCTGTGCCTGAAACTGATTCTGATTCATCTTCTGATGAGTCGGAGGTAAACGATATTCATTACAAAGCTGAGATATTGGCTTATGCTAAGAAAATGTTGAAGAAGAAGGATAGGGAACAGGCACTTGATGATGCATATAATAAGGACATGTTTGATTACCGGGGGTTGCCCAAGTGGTATGTCGATGACGAAAGGAAACACCGAAAGCCAAATAAGCCTATCACCAAAGAGGAAATTGCTGCAATGAAAGCACAATTTAAAGAAATTGATGCTCGGCCTGCGAAGAAGGTGGCTGAGGCCAAAGCACGAAAGAAGCGTATTGCAATGAGGAACCTTGAGAAAGTACGTAAGAAGGCTAATGCTATATCAGATCAGCCAGACATATCTGATCGTTCGAAGAGTAAGCAAATTGACCGATTATATAAAAAAGCTGTTCCTAAGAGGCCTCAAAAGGAGTATGTAGTTGCAAAGAAAGGTGTCCAAGTTAGGACTGGCAAGGGAAAAGTCCTTGTTGATCGCAGGATGAAGAAGGATATAAGGAAAAATGGAAAGGGTAATGCCGGAAAAGGAGGTTCCAAGGGGAAGGGTAAAGCTCCGAAGGGTAAGGTTCCTAAGGGCGGCAAAGGATCTTCACAGTCCTCTGCAAAGAAGGGAAGAAAGGGGGCTAAATAA 2505 0.4327 MGKAKAKGKHRLDKYYHLAKEHGYRSRASWKLVQLNSKFHFLESARAVLDLCAAPGGWMQVAVQRVPVDHLVIGVDLAPIAPIRGAIAIQEDITRPECKSRIKKLMNENGYRAFDVILHDGSPNVGGAWAQEATSQNALVIDAVKLATQFLAPKGIFVTKIFRSQDYSSVVYCLKQLFEKVEVDKPAASRSESAEIYVLGLKYKAPAKIDPRLLDFKHLFQASSQPQAKVLDVLRDNKQKRHRDGYEDGNTTLRKVSSAANFIWSDAPLEILGSVTSISFTDPADLPIKDHKLTTEEVNSLCDDLRVLGKQDFKHLLKWRINIRKALSPTQKADPITTAAVEDKPEMDEDDRILNEMEELTNALDRKKKREKKILAKRRAKETARKATGMQMDAVEDGYVDHELFSLASMKGKKDLVAVDTTEYEGGDGEADDSDNEKIKDGSEHSSSDLDSDEERQRYDEQMEYFLEQAYERFVIKKEGAAKQRKRIKKSYDADSQLLEGGEDDTIIQSKYDSEEEQEVQEANPLMVALNDGAGPTQEEIKDMWFRQDVFAEAEEEEGFEKDDSGNEMDIDGLKEKTSVAEKIKENKTSATVQIDHTRSQAAMEEDFEIVPVPETDSDSSSDESEVNDIHYKAEILAYAKKMLKKKDREQALDDAYNKDMFDYRGLPKWYVDDERKHRKPNKPITKEEIAAMKAQFKEIDARPAKKVAEAKARKKRIAMRNLEKVRKKANAISDQPDISDRSKSKQIDRLYKKAVPKRPQKEYVVAKKGVQVRTGKGKVLVDRRMKKDIRKNGKGNAGKGGSKGKGKAPKGKVPKGGKGSSQSSAKKGRKGAK 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03780 834 Coils Coil 350 377 - -
Car06g03780 834 MobiDBLite consensus disorder prediction 585 627 - -
Car06g03780 834 MobiDBLite consensus disorder prediction 724 765 - -
Car06g03780 834 MobiDBLite consensus disorder prediction 480 507 - -
Car06g03780 834 MobiDBLite consensus disorder prediction 480 497 - -
Car06g03780 834 MobiDBLite consensus disorder prediction 778 795 - -
Car06g03780 834 Pfam FtsJ-like methyltransferase 24 202 IPR002877 GO:0008168|GO:0032259
Car06g03780 834 Gene3D Vaccinia Virus protein VP39 21 210 IPR029063 -
Car06g03780 834 Hamap Ribosomal RNA large subunit methyltransferase E [rlmE]. 8 204 IPR015507 GO:0001510|GO:0008168
Car06g03780 834 MobiDBLite consensus disorder prediction 433 461 - -
Car06g03780 834 PANTHER RRNA METHYLTRANSFERASE-RELATED 5 800 - -
Car06g03780 834 Pfam Spb1 C-terminal domain 604 794 IPR012920 GO:0005634|GO:0006364|GO:0008168
Car06g03780 834 Pfam Domain of unknown function (DUF3381) 237 385 IPR024576 -
Car06g03780 834 PANTHER RIBOSOMAL RNA METHYLTRANSFERASE 5 800 - -
Car06g03780 834 Hamap AdoMet-dependent rRNA methyltransferase <gene_name> [SPB1]. 1 800 IPR028589 GO:0008649|GO:0031167
Car06g03780 834 MobiDBLite consensus disorder prediction 720 834 - -
Car06g03780 834 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 23 204 IPR029063 -
Car06g03780 834 Coils Coil 706 726 - -
Car06g03780 834 MobiDBLite consensus disorder prediction 423 461 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03780 K14857 - gmx:100790741 1184.09