Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03776 ATGGATAATAATAGGGAAGGTGTTCAGATCCAACAGAATCGAAGGTTACCACTACCAGATTTTCTTCAAAGTGTGAATCTCAAGTATGTGAAATTAGGTTACCATTACCTAATCACACACCTTTTAACTCTCTGTTTAATCCCTCTTATGTCTGTAATCATAATCCAAGTTTCTCAAATGAACCCACAAGATATTCACCAACTCTGGCTTCACCTAAAGTACAATCTCGTTAGCGTCATAGCTTGTTCAACTATCCTCGTTTTTGGATCCACCGTTTACATCATGACCCGCCCTAGATCCGTTTATCTTGTTGATTTCTCTTGTTACAAACCCCCTTCTAATCTCAGTGTTAAATTCACCAAATTCGTTGAACATTCCAGACTCAAAGGTGATTTTGATGAATCTTCTTTAGAGTTTCAACGCAAGATTTTGGAACGTTCTGGTCTTGGTGAAGAAACTTATCTCCCTGAAGCTATGCATCAGATTCCACCAACACCTTCTATGGCTTCAGCTAGGGAAGAAGCAGAACAGGTTATGTATGGTGCTCTTGATAATCTTTTTGCTAATACAAAGATTAAGCCAAAAGACATTGGTATCCTTGTTGTTAATTGTAGTTTGTTTAATCCAACACCTTCACTTTCAGCTATGATTGTTAACAAGTATAAACTTAGGGGTAATATAAGAAGTTTCAATTTGGGTGGTATGGGTTGTAGTGCTGGTGTTATAGCTATTGATCTTGCTAAAGACATGCTTCAAGTTCATAGGAACACTTATGCTGTTGTTGTTAGTACTGAGAACATTACTCAAAATTGGTACTTTGGGAACAAGAAATCAATGTTGATTCCGAATTGTTTGTTTCGCGTTGGCGGGGCGGCGGTTCTGCTCTCTAACAAAGGATCTGATAGAAGAAGAGCAAAGTATAAGCTTGTTCATGTTGTGAGAACTCATAAAGGTGCTGATGATAAAGCATTTAAGTGTGTTTATCAAGAACAAGATGATGTTGGTAAAACAGTGAGTGAGCAACTTTTGTTTTTTACAACATTAGTTGTTAAGAAGCTTTTTAATGCAAAAGCTAAGCCTTATATACCTGATTTCAAGCTTGCTTTTGAACATTTCTGCATACATGCTGGTGGAAGAGCTGTGATTGATGAACTTGAGAAAAATTTACAGCTTTTGCCTATGCATGTTGAGGCATCTAGAATGACTTTGCATAGGTTTGGGAACACTTCATCAAGTTCAATTTGGTATGAGTTGGCTTATATTGAAGCTAAAGGGAGAATGAGAAAAGGTAACAGAATTTGGCAGATTGCATTTGGAAGTGGTTTCAAGTGTAACAGTGCTGTGTGGCAGGCTATGAAACATGTGAGGGCTTCATCAAAGAGTCCATGGGAAGATTGCATTGATAGGGATGCAAAATGGACGAGGATACGGATACATGGGATGTAA 1446 0.379 MDNNREGVQIQQNRRLPLPDFLQSVNLKYVKLGYHYLITHLLTLCLIPLMSVIIIQVSQMNPQDIHQLWLHLKYNLVSVIACSTILVFGSTVYIMTRPRSVYLVDFSCYKPPSNLSVKFTKFVEHSRLKGDFDESSLEFQRKILERSGLGEETYLPEAMHQIPPTPSMASAREEAEQVMYGALDNLFANTKIKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGAAVLLSNKGSDRRRAKYKLVHVVRTHKGADDKAFKCVYQEQDDVGKTVSEQLLFFTTLVVKKLFNAKAKPYIPDFKLAFEHFCIHAGGRAVIDELEKNLQLLPMHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRKGNRIWQIAFGSGFKCNSAVWQAMKHVRASSKSPWEDCIDRDAKWTRIRIHGM 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03776 481 PANTHER 3-KETOACYL-COA SYNTHASE 4 338 469 - -
Car06g03776 481 PANTHER 3-KETOACYL-COA SYNTHASE 4 15 337 - -
Car06g03776 481 Gene3D - 112 451 IPR016039 GO:0016746
Car06g03776 481 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 370 450 IPR013747 -
Car06g03776 481 SUPERFAMILY Thiolase-like 286 452 IPR016039 GO:0016746
Car06g03776 481 CDD CHS_like 83 449 - -
Car06g03776 481 PIRSF Very_long_ch_3-ktacl-CoA_syn 20 338 IPR012392 GO:0006633|GO:0016020|GO:0016747
Car06g03776 481 PIRSF Very_long_ch_3-ktacl-CoA_syn 337 477 IPR012392 GO:0006633|GO:0016020|GO:0016747
Car06g03776 481 Pfam FAE1/Type III polyketide synthase-like protein 93 337 IPR013601 GO:0006633|GO:0016020|GO:0016747
Car06g03776 481 SUPERFAMILY Thiolase-like 87 305 IPR016039 GO:0016746
Car06g03776 481 PANTHER 3-KETOACYL-COA SYNTHASE 338 469 IPR012392 GO:0006633|GO:0016020|GO:0016747
Car06g03776 481 PANTHER 3-KETOACYL-COA SYNTHASE 15 337 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03776 Car-Chr6 69442757 69445929 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03776 9 469 Miscellaneous Gene Families AT1G19440 77.959 0.0 814
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03776 K15397 - pvy:116112221 827.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03776 06 69442757 69445929 Car06g03776 06 69442757 69445929 ECH