Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03772 ATGGCGGAAGAGGCAGTTCTCGGTTACCTGGAAAATAACTATGAGATTAGAGATTCAGGTGAATTTGCAGCCGAACGCGGCGTTGACCACAATGAAATGGTCAACGTCATAAAGAGTTTACATGGTTTTAGATACGTTGATGCTGAGGATATTAAGAGAGAAACGTGGGTGTTAACTGATGAGGGAAACATTTATGCTAATGTTGGATCTCCTGAAGTTCAACTAATGTTGGCTATTCCACCTGAGGGTATCTCCAGAGATGAACTTCAAAAAAAGCTTGGTCCTACAGTTTTCAAGATAGGTTGTGCTCAAGCTGCTAAGAACAAATGGTTGGAGATGGGAAAACAACTCATATCTAGGAAGGTTGAACATGTGGAAGACAGAGTCAAAGATTTGCTTCTACAAATACAACAGGGGCAGGGAATTGGTTTAGATGATATCAAAGCACTCAAAGCAAGAAAGCTTATTGTTCCACAGACATGGAAGGGTTACTCAGTGAAAAAGGGTCCTAGCTATGCTCCAAAAAGAAAGAAGGTTGTCACTGATTTAACTCGAGATAATTTTCAGAGTGGCGAGTGGAAGGAATTAGAGTTCAAAGAGTACAATTACAGTGCTAAAGGTCAGCCTCTTGAGGGTGGCCATCTTCATCCACTGTTGAAGGCAAGGAGATTTCTGGAAATTTTCCATTTTCAGGTAAGGTGTCAAATAAAACAGATTTTCCTCTGTATGGGGTTTGAGGAGATGCCCACAAATAATTATGTTGAAAGCAGCTTCTGGAACTTTGATTCCTTATTCCAGCCCCAACAACACCCAGCTCGTGATTCACATGACACATTTTTTTTGGATGCTCCTTCAACAACAAAGGAACTGCCTGAAGATTATGTTAACCGGGTGAAGCAAATTCATGAATCCGGTGGTTATGAGTCTAGAGGATATGCATACGACTGGAAAAGAGAGGAAGCAAATAAAAACCTTCTGCGTACCCACACCACTGCTGTTTCATCCAGGATGCTTTACCAGCTGGCACAGAAATCATTTTCTCCGAAAAAATATTTCTCTATAGATCGTGTATTCCGAAATGAAGCAGTTGACCGAACACATCTCGCCGAGTTCCACCAGATAGAAGGTCTTGTGTGCGATCGAGGACTCACTCTGTGTGACTTAATAGGAGTTCTACATGATTTCTTCTCGCGCTTAGGCATGACCAAGCTGAAATTCAAACCTGCTTACAATCCATACACAGAACCTAGCATGGAGATTTTCAGTTATCATGAAGGCTTTAAAAAATGGGTAGAGGTAGGAAACTCCGGCATGTTTAGACCTGAAATGTTGCGGCCGATGGGACTTCCTGAAGATGTCCAAGTTATTGCATGGGGTCTTTCTCTTGAAAGGCCAACGATGATAATGTATGGGATAGATAACATCAGGGATCTCTTCGGACACAAGGTGGATCTTGGCCTTATTAAGAAAAATCCAATATGTAGACTTGGAATTGAATAA 1500 0.416 MAEEAVLGYLENNYEIRDSGEFAAERGVDHNEMVNVIKSLHGFRYVDAEDIKRETWVLTDEGNIYANVGSPEVQLMLAIPPEGISRDELQKKLGPTVFKIGCAQAAKNKWLEMGKQLISRKVEHVEDRVKDLLLQIQQGQGIGLDDIKALKARKLIVPQTWKGYSVKKGPSYAPKRKKVVTDLTRDNFQSGEWKELEFKEYNYSAKGQPLEGGHLHPLLKARRFLEIFHFQVRCQIKQIFLCMGFEEMPTNNYVESSFWNFDSLFQPQQHPARDSHDTFFLDAPSTTKELPEDYVNRVKQIHESGGYESRGYAYDWKREEANKNLLRTHTTAVSSRMLYQLAQKSFSPKKYFSIDRVFRNEAVDRTHLAEFHQIEGLVCDRGLTLCDLIGVLHDFFSRLGMTKLKFKPAYNPYTEPSMEIFSYHEGFKKWVEVGNSGMFRPEMLRPMGLPEDVQVIAWGLSLERPTMIMYGIDNIRDLFGHKVDLGLIKKNPICRLGIE 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03772 499 CDD PheRS_alpha_core 216 484 - -
Car06g03772 499 TIGRFAM pheS: phenylalanine--tRNA ligase, alpha subunit 167 490 IPR004529 GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432
Car06g03772 499 PANTHER PHENYLALANINE--TRNA LIGASE ALPHA SUBUNIT 3 497 - -
Car06g03772 499 PANTHER PHENYLALANYL-TRNA SYNTHETASE 3 497 - -
Car06g03772 499 Gene3D - 7 199 - -
Car06g03772 499 Pfam tRNA synthetases class II core domain (F) 231 485 IPR002319 GO:0000049|GO:0004812|GO:0005524|GO:0043039
Car06g03772 499 Gene3D - 58 156 - -
Car06g03772 499 Gene3D - 71 125 - -
Car06g03772 499 SUPERFAMILY Class II aaRS and biotin synthetases 228 484 IPR045864 -
Car06g03772 499 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 281 492 IPR006195 -
Car06g03772 499 Pfam PheRS DNA binding domain 3 70 125 IPR040725 -
Car06g03772 499 Pfam PheRS DNA binding domain 1 3 56 IPR040724 -
Car06g03772 499 Gene3D Bira Bifunctional Protein; Domain 2 229 498 IPR045864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03772 Car-Chr6 69380269 69386677 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03772 K01889 - gmx:100792325 897.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03772 06 69380269 69386677 Car06g03772 06 69380269 69386677 ECH