Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03766 ATGGCTCTAACTACCAACCCTTCATCCCTCCTTTGTGTTTCCCTCATCGCCATTGTCCTCTACTTTGCTGATTCACAATCCTTCATCGGAGTAAACTACGGCCAAGTCGCCGACAACCTTCCGTCACCGGACGCCACGGCGGGGCTACTTAAATCCACCACCATTGGGAAAGTCCGACTTTACGGCGCCGATCCAGCCATCATAAAAGCGCTGGCAAATTCCGGCATCGGAATAGTCATCGGCGCCGCCAACGGCGACATTCCGAGTCTAGCCTCAAATCCCAACTCAGCAACTCAGTGGGTCAACTCAAACGTGTTACCATACTACCCTGCCAGCAACATCACTCTGATCACCGTCGGTAATGAAGTCATGACCTCCGGCGACAATGGTCTCATATCACAGCTTCTCCCGGCGATTCAAAATGTCCAAAATGCCCTTAACTCGGTCTCACTAGGTGGCATTAAGGTGTCCACGGTGCATTCGATGGCTGTGTTGACTCAGTCGGATCCTCCATCTTCCGGGTCATTTGACCCGGCTCTTCAAGACACTCTCAAACAGTTGCTGGAGTTTCAGAAAGATAACAAATCGCCGTTCACTATTAACCCGTATCCGTTTTTCGCTTACCAGAGTGACCCAAGATCCGAAACGCTTGCATTCTGTTTATTCCAGCCAAATTCGGGTCGGGTCGATTCGGGTAACGGTAAACTTTACACCAACATGTTCGACGCTCAGGTTGATGCTGTCCATTCTGCATTGGGTGCAATGGGATTCGAAGAGATAGAAATAGTGGTAGCTGAGACAGGATGGCCCTCACGTGGGGACAACAATGAAATTGGACCAAGTGTTGAAAATGCAAAAGCATATAATGGGAACCTAATCACACATCTTAGATCATTGGTTGGTACTCCTTTGATGCCTGCAAAATCTATTGACACATACATTTTTGGTCTCTATGATGAAGATTTGAAACCTGGCCCTGGATCAGAACGCGCGTTTGGTCTTTACAAAATTGATCTTACTGTGGCATATGATGTTGGCTTAGACAAGTCTACCCAAAAGAGTCCATCAAGTAGTCCAAAGGGTCGAGTTACACCAGCAACACAATGGTGCATTCCAGTAGTGGGAGTAACTGATTCTCAGCTACAAACAAATCTTGACTATGTGTGTAGTAGAGAAGGCATAGATTGTAAAGAAATTCAACAAGGAGGTGCTTGTTTTGAACCTAATACAATAGCATCTCATGCTGCCTATGCCATGAATTTTTATTACCAAAAATTTGGCAAAAATCCTTGGAACTGTGATTTTGCTCAAACAGCAACTCTTACATCCCAAAATCCAAGTTACAATACATGCATTTATCCAAGTGGAAGTACCTGA 1377 0.4582 MALTTNPSSLLCVSLIAIVLYFADSQSFIGVNYGQVADNLPSPDATAGLLKSTTIGKVRLYGADPAIIKALANSGIGIVIGAANGDIPSLASNPNSATQWVNSNVLPYYPASNITLITVGNEVMTSGDNGLISQLLPAIQNVQNALNSVSLGGIKVSTVHSMAVLTQSDPPSSGSFDPALQDTLKQLLEFQKDNKSPFTINPYPFFAYQSDPRSETLAFCLFQPNSGRVDSGNGKLYTNMFDAQVDAVHSALGAMGFEEIEIVVAETGWPSRGDNNEIGPSVENAKAYNGNLITHLRSLVGTPLMPAKSIDTYIFGLYDEDLKPGPGSERAFGLYKIDLTVAYDVGLDKSTQKSPSSSPKGRVTPATQWCIPVVGVTDSQLQTNLDYVCSREGIDCKEIQQGGACFEPNTIASHAAYAMNFYYQKFGKNPWNCDFAQTATLTSQNPSYNTCIYPSGST 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03766 458 Gene3D - 362 454 - -
Car06g03766 458 Pfam X8 domain 368 440 IPR012946 -
Car06g03766 458 Pfam Glycosyl hydrolases family 17 29 345 IPR000490 GO:0004553|GO:0005975
Car06g03766 458 ProSitePatterns Glycosyl hydrolases family 17 signature. 260 273 IPR000490 GO:0004553|GO:0005975
Car06g03766 458 Gene3D Glycosidases 28 354 - -
Car06g03766 458 SMART X8_cls 368 453 IPR012946 -
Car06g03766 458 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 15 450 IPR044965 GO:0004553|GO:0005975
Car06g03766 458 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 7 15 450 - -
Car06g03766 458 SUPERFAMILY (Trans)glycosidases 29 346 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03766 Car-Chr6 69318733 69324054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03766 23 454 Miscellaneous Gene Families AT2G16230 66.590 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03766 - - gmx:100778892 733.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03766 06 69318733 69324054 Car06g03766 06 69318733 69324054 ECH