Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03763 ATGGAGGAAAAACGTCCTCCGTCCGCCGTCGATTCACCGGCATCAGAACCCGCAACATCTCGCCGCCGTGCCGGTTCCAACAAGAGAAAGTCCGGCTCTCTCAACGCCTCCAATTCCTCTTCCACCCCTTCCAAACGCATTACTCGCGAGAAGCCCTCATCTCTTCACCCTCCTCCCCTCCATAACGGCCCCTTAACTAGGGCTCGACAAATCCCTAACAACTTCTCCGCCGTTTCGACTTCTTCACCCGTCGGAGCTTCCGCTTCTGCCCCCGCCGCAGTGAAACATGCTCCACAGACACAGGCTTTGGCTCTGGCGGCGGAGCAACTCAAGAAGGAAAGCGAGTTGGTGTCTCTCGAAGCTTCGATTGAAGCTGAATTTCAAGCTATTAGATCTCGTGATACCAACGCTCACGCTGTTCCTACTCATTGTGGTTGGTTTTCATGGTTGAATATCCATCCAATTGAGGAACGTATGTTGCCTTCTTTCTTTAATGGCAAGACTGAAAATCGGACTCCTGATAAATACATGGAAATACGGAATTCGATAATGAAGAAGTTTCATTCAAATCCAAATGTACAAATCGAATTGAAAGATTTATCAGAGCTTGATGTTGGGGACTTGGATGCTAGGCAAGAGATAATGGAGTTTCTAGACTATTGGGGTTTAATTAACTTCCACCCTTTCCCTCCAACGGATTCTGCAATGGCAAGCACCAGCGATGATGGGGAAGCAGTAAAGAATTCCTTGCTTGAAAAATTCTATCACTTTGAAACTCTCCAATTACGGCCGCCTGCTGTTCAGAAGACTGGCCTAATGGCACCTGCTATGACCTCTGGCTTGTTTCCAGAGTCAACGATTGCTGAAGAGTTGGTGAAACAAGAGGGCCCAGCAATTGAGATGCTTGAGTACCATTGCAACTCTTGTTCTGGTGATTGTTCGCGCAAACGTTACCACTGCCAGAAGCAGGCAGATTTTGATCTATGTACGGACTGTTTTAACAATAGAAGATTTGGCTCCGGCATGTCTTCGTTGGATTTTATACTCATGGAACCTGCTGAAGCTGCAGGAGTTAGTGGTGGAAAGTGGACTGATCAGGAGACACTTCTGCTCCTTGAAGCATTAGAACTTTATAAAGAAAATTGGAATGAAATTGCAGAACACGTTGGAACAAAATCAAAAGCTCAGTGCATATTGCACTTTGTTCAAATGCCAATCGAGGATGCCTTTGTTGACTGTGGTGATGATGATGTTGATGCTAGTTGCAAAGAAACTGTAGATCCAGGTGCAACAAATAATGATTTGTCCATTGGTAAAGATAAAGATGCTTCAGAAATTATTGAGAATGGTGCTAAAGATAGCATCAAAGACCATGATGAAACTTCTCAGGCTGAAGATGTTAAAGTGAAAGATAATCAAGAGGAGACTCCAAAGTTACAACAAGATGGTAGTGATGAGAAAACTATTGAGGGAACTTCTAAATTAGAAGACGATGTTAAAGTAAAATTTGGTGAGGAAGTAGGCAATGATTGTGCTTTAAATGCTCTTAAGGAAGCATTTACAGCGGTTGGTTATTCTCCGGAACTTGAAGGCCCATTTTCATTTGCTGAAGTGGGTAATCCTGTCATGACATTGGCAGCTTTCCTTGGACAGTTGGTGGGTTCGGATATGGCTGTTGCTTCTGCTCATAACTACATAAAGTCCTTGTCTGGAAATGCTCCTGGAACTGAGATTGCTTCAAGATGTTGCTTTCTTCTAGAAGATCCACCAGATGATAAGGAAACAACTGCTTCTGAGAGGGATTTTAAAAGTGAGGGAGATCAGACTGACAAAAATGTACGACAGGATTCAGATGATAAAGATTTAGAAAATGATCACAAGATAACAATTGCAAGTGATGCTTCAGAAGACAAGATACTTCTAGCTTCTACAGATGGTGGAGTCTCAGAAAAATCAATTTCTTCAAGGGGGCAAGCAATGATTAATTCTGAGTCTGGGCTTGACGATTGTAATGATCCCAGCATCTCAAAGGTACCCAATGATCAAGCTCTGGGTATTCTTCCCAATTCAGGTGATTCAACATCCAAGGCTGAAATTCCCCCTAATTCTGAGGAGGTTCGGGAGGGAACTTCGAATGAAGAACCTTGCCGTCCTATAGAGGAACAAAAAGAACTAAGTGTGTCTGATTCTCATCCATCAGAAAAAAATGAGCTTCAACAGTCAATTAAATCCAATTTACCAGGTGAGCATTCAAAGCCAGTGGAGACACCAAAATACGATGAAATGGTGTCTGATTCTATGCCCTCAGATAAGAGCAAGCCTCAAAAACAGATATCTACAAATGCAGTCTCTGAGTGTGATAAAACTACAGACTCTGCAATGGATGTTGATGTAGTTTCTAATTCATTGCCATCAAATATCGACTCCCAGCCACTGATATCTTCCCAAGATAATGGTATACAAAAGGATGGAGATATGATGTCACCTTCACATCCAATTAGATCGAATTCTGGTGCTGAAAATGGTGCAATTGCAGGGGGAGGTGAAGATCATGCAGGAAATGGTACAGAAATGAAAAATGATGGTACTAAGACTAAACAGGATAACAGCTTTGAGAAAGTGAAACGTGCAGCTGTTTCTACACTAGCTGCAGCAGCAGTGAAAGCAAAATTTCTAGCAAATCAAGAAGAAGACCAAATCCGACAACTTACTTCATTGTTGATAGAGAAACAGTTGCATAAGTTGGAAACAAAGTTGGCTTTTTTCAATGATATTGAAAATGTTGCGATGAGAGTAAAAGAGCTTTTAGAGCGGTCACGGCATAAGCTTTACCATGAACGTGCTATGATAATTGCATCCCGCCTTGGTTTACCGGCTTCCTCATCCAGAGGTGTACCATCATCCATACCAACCAATAGAGTTCCTATGAATTTTGCAAACTCACTCCCAAGACCACAAATCATGATGAATCCCCAAGGACCACTGATTTCTAGACCTGTGGGCACCACAGCTACCACACTTCCAAACCCATTAATGTCTGCAACTGCAGCAGGAAGTTCAGTTCTGCCATCCAACCAGGAAAATCTTTCTTCTGTTGGGACAAAATAG 3108 0.4282 MEEKRPPSAVDSPASEPATSRRRAGSNKRKSGSLNASNSSSTPSKRITREKPSSLHPPPLHNGPLTRARQIPNNFSAVSTSSPVGASASAPAAVKHAPQTQALALAAEQLKKESELVSLEASIEAEFQAIRSRDTNAHAVPTHCGWFSWLNIHPIEERMLPSFFNGKTENRTPDKYMEIRNSIMKKFHSNPNVQIELKDLSELDVGDLDARQEIMEFLDYWGLINFHPFPPTDSAMASTSDDGEAVKNSLLEKFYHFETLQLRPPAVQKTGLMAPAMTSGLFPESTIAEELVKQEGPAIEMLEYHCNSCSGDCSRKRYHCQKQADFDLCTDCFNNRRFGSGMSSLDFILMEPAEAAGVSGGKWTDQETLLLLEALELYKENWNEIAEHVGTKSKAQCILHFVQMPIEDAFVDCGDDDVDASCKETVDPGATNNDLSIGKDKDASEIIENGAKDSIKDHDETSQAEDVKVKDNQEETPKLQQDGSDEKTIEGTSKLEDDVKVKFGEEVGNDCALNALKEAFTAVGYSPELEGPFSFAEVGNPVMTLAAFLGQLVGSDMAVASAHNYIKSLSGNAPGTEIASRCCFLLEDPPDDKETTASERDFKSEGDQTDKNVRQDSDDKDLENDHKITIASDASEDKILLASTDGGVSEKSISSRGQAMINSESGLDDCNDPSISKVPNDQALGILPNSGDSTSKAEIPPNSEEVREGTSNEEPCRPIEEQKELSVSDSHPSEKNELQQSIKSNLPGEHSKPVETPKYDEMVSDSMPSDKSKPQKQISTNAVSECDKTTDSAMDVDVVSNSLPSNIDSQPLISSQDNGIQKDGDMMSPSHPIRSNSGAENGAIAGGGEDHAGNGTEMKNDGTKTKQDNSFEKVKRAAVSTLAAAAVKAKFLANQEEDQIRQLTSLLIEKQLHKLETKLAFFNDIENVAMRVKELLERSRHKLYHERAMIIASRLGLPASSSRGVPSSIPTNRVPMNFANSLPRPQIMMNPQGPLISRPVGTTATTLPNPLMSATAAGSSVLPSNQENLSSVGTK 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03763 1035 SMART zz_5 300 344 IPR000433 GO:0008270
Car06g03763 1035 MobiDBLite consensus disorder prediction 753 767 - -
Car06g03763 1035 MobiDBLite consensus disorder prediction 29 48 - -
Car06g03763 1035 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 355 397 IPR017930 -
Car06g03763 1035 MobiDBLite consensus disorder prediction 999 1035 - -
Car06g03763 1035 MobiDBLite consensus disorder prediction 686 700 - -
Car06g03763 1035 Pfam SWIRM domain 141 226 IPR007526 GO:0005515
Car06g03763 1035 ProSiteProfiles SWIRM domain profile. 138 235 IPR007526 GO:0005515
Car06g03763 1035 CDD ZZ_RSC8 304 348 IPR041984 -
Car06g03763 1035 MobiDBLite consensus disorder prediction 701 731 - -
Car06g03763 1035 ProSiteProfiles Myb-like domain profile. 355 405 IPR001005 -
Car06g03763 1035 MobiDBLite consensus disorder prediction 589 624 - -
Car06g03763 1035 MobiDBLite consensus disorder prediction 424 443 - -
Car06g03763 1035 ProSitePatterns Zinc finger ZZ-type signature. 306 332 IPR000433 GO:0008270
Car06g03763 1035 Pfam Zinc finger, ZZ type 303 338 IPR000433 GO:0008270
Car06g03763 1035 PANTHER SWI/SNF COMPLEX-RELATED 38 999 - -
Car06g03763 1035 Gene3D - 358 409 - -
Car06g03763 1035 SUPERFAMILY RING/U-box 298 357 - -
Car06g03763 1035 Pfam SWIRM-associated region 1 881 957 IPR032451 -
Car06g03763 1035 MobiDBLite consensus disorder prediction 450 491 - -
Car06g03763 1035 ProSiteProfiles Zinc finger ZZ-type profile. 301 355 IPR000433 GO:0008270
Car06g03763 1035 MobiDBLite consensus disorder prediction 732 747 - -
Car06g03763 1035 Pfam Myb-like DNA-binding domain 361 403 IPR001005 -
Car06g03763 1035 Gene3D - 299 347 IPR043145 -
Car06g03763 1035 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3D 38 999 - -
Car06g03763 1035 CDD SANT 379 404 IPR001005 -
Car06g03763 1035 MobiDBLite consensus disorder prediction 1 68 - -
Car06g03763 1035 SMART sant 359 407 IPR001005 -
Car06g03763 1035 SUPERFAMILY Homeodomain-like 358 411 IPR009057 -
Car06g03763 1035 MobiDBLite consensus disorder prediction 768 791 - -
Car06g03763 1035 MobiDBLite consensus disorder prediction 662 791 - -
Car06g03763 1035 SUPERFAMILY Homeodomain-like 145 227 IPR009057 -
Car06g03763 1035 MobiDBLite consensus disorder prediction 662 678 - -
Car06g03763 1035 Gene3D - 144 229 IPR036388 -
Car06g03763 1035 ProSiteProfiles SANT domain profile. 358 409 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03763 Car-Chr6 69252950 69260405 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03763 304 401 EF-hand Containing Proteins AT3G07740 37.383 2.61e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03763 K11649 - gmx:100799723 1370.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03763 06 69252950 69260405 Car06g03763 06 69252950 69260405 ECH