Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03736 ATGTTGCTCTCCAAAGGTATTACCCCTAATGTTACAACTTTAAATTCTTTGATTTCTAGGGTTTGTAAAATTCGTGGAGTGGATGCTGGGTATGAAATTTACCGTGAGTTTTTTAGGTTAGATGTGGAAAAATGTGAAATTCCGAAAAGGGGTTCTGGTTTTAGAGTAGTTACCCCTAATGTGCATACTTATAATACATTGATGTTGTGTTGTTATCAAGATGGTTTGCTGGAGAAGGTTGAGGAAATTTGGAATGAAATGGGTCAAATTAGTTGTGTTCCCAATGCTTATAGCTATAGTTTATTGATGGCTGCGTTTTGTGAGGGAGGTAAAATTGGAGATGCTGATGAGTTGTGGAAGGAAATGAGAAAGGAGGGAATGGAGCCTGATGTGATTAGTTATAACACTATGATTGGTGGGTTTTGTAAGGTTGGTGATGTTGGAAGAGCTGAGGATTTTTTCAGAGAAATGGGACTGGCCGGTATTGATGCCACTGGTTCAACTTATGAGCATCTTGTTAAGGGGTATTGTAAAATTGGGGATGTTGATTCGGCTGTTCTTGTTTATAAGGATATGTGTAGGAAGGCTTTTAGGCCTGATGCATTGACACTTGACATGATGGTTAGGTTGCTTTGTGATAAGGGTAGAGTTGAGGAAGCTATTGAGTTTTTCAGGAGTGGAGTTGGTAAGTTTGATTTAGTTCCAAAGGAGAAGAGTTATGAGACCTTGATTAAGGGGTTGTGTTTTGAGGGGAGGATGGAAGAAGCATTGAAGCTTCAGGCTGAGATGGTAGGAAAAGGGTTTCAACCGAAATCTGAAATATATGAAGCTTTTATTGATGGGTACATTAGACAAGGGAATGAGGAAATGGCAGAAGCTTTGAGGAAAGAAATGTTGCAAACTCAGATGCAGAGCTAA 918 0.3932 MLLSKGITPNVTTLNSLISRVCKIRGVDAGYEIYREFFRLDVEKCEIPKRGSGFRVVTPNVHTYNTLMLCCYQDGLLEKVEEIWNEMGQISCVPNAYSYSLLMAAFCEGGKIGDADELWKEMRKEGMEPDVISYNTMIGGFCKVGDVGRAEDFFREMGLAGIDATGSTYEHLVKGYCKIGDVDSAVLVYKDMCRKAFRPDALTLDMMVRLLCDKGRVEEAIEFFRSGVGKFDLVPKEKSYETLIKGLCFEGRMEEALKLQAEMVGKGFQPKSEIYEAFIDGYIRQGNEEMAEALRKEMLQTQMQS 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03736 305 Pfam PPR repeat 235 264 IPR002885 -
Car06g03736 305 Pfam PPR repeat 126 157 IPR002885 -
Car06g03736 305 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 236 270 IPR002885 -
Car06g03736 305 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 165 199 IPR002885 -
Car06g03736 305 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 1 303 - -
Car06g03736 305 Pfam PPR repeat family 168 212 IPR002885 -
Car06g03736 305 Pfam PPR repeat family 59 107 IPR002885 -
Car06g03736 305 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 60 94 IPR002885 -
Car06g03736 305 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED 1 303 - -
Car06g03736 305 Gene3D Tetratricopeptide repeat domain 111 215 IPR011990 GO:0005515
Car06g03736 305 Gene3D Tetratricopeptide repeat domain 1 110 IPR011990 GO:0005515
Car06g03736 305 Gene3D Tetratricopeptide repeat domain 216 304 IPR011990 GO:0005515
Car06g03736 305 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 95 129 IPR002885 -
Car06g03736 305 TIGRFAM PPR: pentatricopeptide repeat domain 62 95 IPR002885 -
Car06g03736 305 TIGRFAM PPR: pentatricopeptide repeat domain 168 201 IPR002885 -
Car06g03736 305 TIGRFAM PPR: pentatricopeptide repeat domain 97 131 IPR002885 -
Car06g03736 305 TIGRFAM PPR: pentatricopeptide repeat domain 239 270 IPR002885 -
Car06g03736 305 TIGRFAM PPR: pentatricopeptide repeat domain 132 162 IPR002885 -
Car06g03736 305 Pfam PPR repeat 275 299 IPR002885 -
Car06g03736 305 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 130 164 IPR002885 -
Car06g03736 305 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 200 235 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03736 57 303 Miscellaneous Gene Families AT4G11690 31.984 1.13e-42 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03736 - - lja:Lj3g3v3338010.1 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03736 06 69024660 69025577 Car06g03736 06 69024660 69025577 ECH