Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03732 ATGTGGAAGAGGATGGAATTTCAAGAAGAAGCGGTTCAATTGATAAACTCAGATTTCAGAGACTTGAGTCTAGCTGCTAATCAACTCGCTAATCATCTCGTCCAACTCGGTCGCTTTGGCTTTGGAGCTTCTTTCTTCGGATTCTTTGCCGCCATTGCTGCTATCTATTTGCTGGTTTTGGATCGCACAAACTGGAAGACTAACATTCTTACATCACTACTCATTCCATACATTTTCTTCAGCTTGCCTTCAATAGTTTTCGGTGTCTTCAGGGGAGAGATTGGAAAATGGGTTGCTTTAGTTGCTGTTGTATTAAGGCTTTTTATTCCAAAACATTTCCCTGAATGGCTGGATTTGCCAGGTGCTTTGGTGCTTCTGATCGTTGTAGCTCCTAATGTAATTGCAAGCACCTTTAGAGACGACATCGTGGGGGTGATTGTGTGCCTTGTGATTGCATGTTATTTGCTACAAGAACATATTCGAGCATCTGGTGGTTTCAGAAATTCCTTCACTAGAGCCAATGGCTTATCAAATTCCATTGGCATAGTACTTCTGATGGTCTACCCCGTCTGGGCACTCATCGTCATAATTCTTTAG 597 0.4238 MWKRMEFQEEAVQLINSDFRDLSLAANQLANHLVQLGRFGFGASFFGFFAAIAAIYLLVLDRTNWKTNILTSLLIPYIFFSLPSIVFGVFRGEIGKWVALVAVVLRLFIPKHFPEWLDLPGALVLLIVVAPNVIASTFRDDIVGVIVCLVIACYLLQEHIRASGGFRNSFTRANGLSNSIGIVLLMVYPVWALIVIIL 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03732 198 Pfam Cold acclimation protein WCOR413 7 185 IPR008892 GO:0016021
Car06g03732 198 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 1-RELATED 2 197 - -
Car06g03732 198 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2 2 197 IPR008892 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03732 Car-Chr6 68977178 68979881 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03732 - - gmx:100811430 296.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03732 06 68977178 68979881 Car06g03732 06 68977178 68979881 ECH