Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03710 ATGATGAATAAGCCGCAACAACAACAACAAGAAGATGAACGTAATAACACTACCACTCTCGACTCCAGATTCAGCCAGACCCTCCGAAACGTTCAAGGGTTACTCAAAGGTCGTAGCATGCCCGGTAAAGTATTGTTGAGCCGAAGGTTAGAACCTTCCAATAACTCTAACTCAAAGGCGTCCTCAACATATTACAGAAGGAGTTTCTCACAAAATGATGCTCGCACAAGTGATCACACACTTGGGGCAGTAGAGGAAGAAGTTCAGAGTACAAGTAAAACAGTAGGTATTCCTAATGTTAGTAAGTTAAAAATATCAACCTCCTTTGTGGAAAGAGAGAACTTATCTGAAGACACCCGCAAGTATACTGTGGGCGCTAGAGCTACAGATACGGCAAGAGTTACAAAGTTCACTAAGGTGCTTTCTGGAACAGTGGTTatattagACAAATTGCGTGAATTAGCTTGGAGTGGTGTTCCGGATTATAAGCGTCCTAAAGTGTGGAGACTCCTCTTGGGATATGAACCACCTAATTCAGATAGAAAGGAGGGAGTTCTGAGAAGGAAGCGCCTAGAGTATCTTGACTGCATTTCTCAGTATTATGATATTCCTGATTCAGAACGTTCAGGTGACGAGGTCAACATGCTTCGCCAGATTGCCGTTGATTGTCCAAGAACTGTACCCGATGTTCCTTTCTTCCAGCAAAAACAAGTTCAGAAATCATTGGAACGTATTCTTTATGCATGGGCCATTCGACATCCTGCAAGTGGATATGTTCAAGGGATAAATGATCTCGTTACACCGTTTTTAGTTGTTTTCTTATCAGAATACTTAGAAGGGGGTGTAGATAATTGGTCCATGTCTGATTTACCTTCAGACAAAATCTATAATATAGAGGCTGACTGCTACTGGTGCTTGTCAAAGTTGCTTGATGGAATGCAAGACCATTACACATTTGCTCAACCTGGAATTCAGAGGCTTGTATTTAAATTGAAGGAATTGGTCAGAAGGATCGACGAGCCTATTTCACAACATATAGAGGATCAGGGACTTGAATTTCTTCAGTTTGCTTTCCGCTGGTTCAACTGTCTTCTGATCCGTGAGATACCCTTCCATCTCATCACACGCCTTTGGGACACATATCTGGCTGAAGGAGATGCCTTACCAGACTTCTTAGTGTATATATTTGCCAGTTTCCTTCTAACGTGGTCAGACAAGCTCCAGAGTTTTGAATTCCAGGAGTTGGTAATGTTCCTTCAACACCTTCCAACTCAGAACTGGACTCACCAGGACCTCGAGATGGTGCTTTCCCGGGCATTTATGTGGCACAGCATGTTCAACAACTCTCCAAGCCATTTCGCTAGCTGA 1368 0.4276 MMNKPQQQQQEDERNNTTTLDSRFSQTLRNVQGLLKGRSMPGKVLLSRRLEPSNNSNSKASSTYYRRSFSQNDARTSDHTLGAVEEEVQSTSKTVGIPNVSKLKISTSFVERENLSEDTRKYTVGARATDTARVTKFTKVLSGTVVILDKLRELAWSGVPDYKRPKVWRLLLGYEPPNSDRKEGVLRRKRLEYLDCISQYYDIPDSERSGDEVNMLRQIAVDCPRTVPDVPFFQQKQVQKSLERILYAWAIRHPASGYVQGINDLVTPFLVVFLSEYLEGGVDNWSMSDLPSDKIYNIEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDEPISQHIEDQGLEFLQFAFRWFNCLLIREIPFHLITRLWDTYLAEGDALPDFLVYIFASFLLTWSDKLQSFEFQELVMFLQHLPTQNWTHQDLEMVLSRAFMWHSMFNNSPSHFAS 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03710 455 SMART tbc_4 155 411 IPR000195 -
Car06g03710 455 MobiDBLite consensus disorder prediction 1 33 - -
Car06g03710 455 MobiDBLite consensus disorder prediction 1 65 - -
Car06g03710 455 Pfam Rab-GTPase-TBC domain 163 406 IPR000195 -
Car06g03710 455 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 196 319 - -
Car06g03710 455 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 321 443 IPR035969 -
Car06g03710 455 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 4 452 - -
Car06g03710 455 MobiDBLite consensus disorder prediction 49 65 - -
Car06g03710 455 PANTHER GTPASE-ACTIVATING PROTEIN GYP1-LIKE 4 452 - -
Car06g03710 455 ProSiteProfiles TBC/rab GAP domain profile. 158 385 IPR000195 -
Car06g03710 455 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 137 345 IPR035969 -
Car06g03710 455 Gene3D - 320 455 - -
Car06g03710 455 Gene3D - 132 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03710 Car-Chr6 68825842 68832440 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03710 K20360 - gmx:100819281 767.303