Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03709 ATGGCTGTCAACGATGCTGACCAGTCTCACAAAGCTCACAGGACCCGTCAAGCCGGTCCCaagaagaagatcaagtccaagaagaagcacgatgatgaagccgaagaTCAGAAAATGCTTAACCCTAAGGCTTTCGCATATTCTTCATCCAAAAAAGTCAAGAGATTGCAATCTCGTTCCGTTGAGAAAGAACAGCGCCGCCTTCATGTTCCAATCATTGATCGTACTTACGGTGAACCTCCTCCATTCGTCATCGTCGTGCAGGGTCCTCCTCAGGTTGGAAAGTCACTTTTGATTAAGACTTTGATTAAGCATTATACAAAGCAGAATCTGCCTGAAGTTCGCGGTCCAATTACAATTGTATCTGGAAAGCAAAGGCGGCTGCAGTTTGTGGAATGTCCAAATGATATCAATGGCATGATAGATGCAGCTAAGTTTGCTGATCTAGCACTTCTTCTTATAGATGGAAGTTATGGTTTTGAAATGGAAACATTTGAATTTCTTAATATTTTGCAAGTTCACGGCTTCCCAAAGGTCATGGGGGTTCTTACTCATCTTGATAAATTCAAGGACGTTAAAAAGTTGAGGAAAACAAAAAAACTGCTAAAAAACCGTTTTGCAACCGAAATGTATGCTGGAGCTAAATTGTTTTACTTATCAGGCCTTATTCATGGAAAGTATGTCAAACGCGAAGTTCACAATCTTGCCAAATTCATATCAGTCATGAAGTTTCATCCTTTATCTTGGCGAACTTCCCATCCCTATGTTTTGGTGGATCGTTTTGAAGATATCACTCCTCCTGAAAAAGTGCATGCAAATAATAAATGTGACCGAAAAGTCACACTTTATGGCTATCTTAGAGGTTGTAATTTGAAAAAGGGAAATAAGGTGCACATAGCTGGAGTGGGTGATTACGGTTTAGCTCATGTTACTGGTTTACCTGATCCATGTCCTCTCCCTTCTGCTGCCAAAAAGAAAGGACTGCGTGATAAAGAAAAGTTATTTTATGCTCCCATGTCTGGCATTGGGGATCTTTTGTATGACAAAGATGCTGTGTACATAAATATTAATGATCACTTTGTTCAATTCTCAAAAGTTGATGATGAAAACTCTGCTATGACGAGCAAAGGAAAGGACAGGGATGTAGGGGAGGTTTTGGTGAGATCGCTTCAGAATATCCAACACTCAATCAATGAAAAGCTAGAGAACAGCTCTATCAATCTTTTTGGCCAAAAGCCAAAAGTGCCATCAGAAGCTTTAGGTGATGCACAGGGTACAAACAAAGATGTAGAGCAGGATGGAAAATTAGAAACTTTGGATAAATATCAGCCTGTAGATTCGGATGGTTCAGAATCTTCTGACCAGGATGAAGATGGTGATGCAACCGACAGTGAAGCTATAAATAGAGACCACATAAAAGAACAGATTGAGTTTCACAATGGAAGACAAAGGAGAAAGGCAATCTTTGGAAGTGACGCAGATCAAAGTGATCTGATGGATTCGGGAgaagaggaagaggaagaggaagaggaagaggaagaggaagaggaagaggaagaggaTGGTGCTGCCAATGATTGTGGGGCATCTTCTGATTCAGAATCTTCAGAAGAGGATGAAGATGACAACAATGATGATGATACACATGAAGATGACATGGGAAATGTTTCAAAGTGGAAGGAGTCATTGGCAGACCGATCTCTTGCACGGAAACCTCCTAGTTTGATGCAACTCGTGTATGGGGATAATTCGACCTCTATGAACAAAGGGAATGATAGTAGCGAGGATGAGGAAAATGAAGGTGACTTTTTTATGCCTAAAGAACTGATAAAGCAAAATATTAGAGATGGACTGGATGATAGAATGGTCGATGCCGAAGATTGTTCCAAGTGTGCCCAACTTATGAGTCAGAAATGGGACGAGAAAGATAACGAGGAGATTCGCAACCGTTTTGTGTCTGGAAATTTGGCAAAAGCTGCACTCAGAAATGCACTGCAAAAAGATAATACTGAAGAGGAAAGTGAAGATGTCTTTGGTGACTTCGAAGATTTAGAAGCAGGAGAACAATATGAGCTTTATCAGACAGAGGATGGTTTTGCGCTAACAACAAATAAAGGAGTTGATTTAGAAGCTGAGCAGCGGAGGCTTAAGAAACTTGCTAAACGTGCAGAATTTGATGCTCAACAatatggcgatgaccgagagacaccagaggaagatactggcaaTGAAAATGAAGACAAGGTCCACCATGACCAGCCTAAAGAAAGTAACTATTTTGACAGGTTAAAAGAGGAGATTGAGCTTCGAAAACAAATGAATATTGCTGAGCTGAACGATCTTGACGAGGATACCAGATTAGAGGTAGAAGGCTTCCGAACGGGGACATACCTTAGATTGGAGGTTCATGATGTTCCCTGTGAAATGGTCGAACACTTTGATCCTTACCATCCAATATTGGTTGGAGGAGTTGGTTTAGGGGAGGAAAATGTTGGATACATGCAGGCCAGGTTAAAGCGGCATAGGTGGCACAAGAAAGTCCTGAAGACTAGAGACCCAATTATTGTTTCTGTTGGATGGAGGCGTTACCAGACAACGCCAATTTATGCTATTGAGGATCACAATGGAAGGCACCGTATGCTAAAATACACTCCAGAACACATGCATTGCCTTGCTATGTTTTGGGGCCCTCTTGCACCTCCTAACACTGGAATAGTTGCTGTTCAGAGTTTATCAAACAATCAGGCAAATTTTAGGATTACCGCAACTGCAGTTGTACTTGAGTTTAATCACGCTGCAAGAATAGTGAAGAAAATCAAATTGGTTGGTCATCCGTGCAAGATATTCAAGAAAACAGCACTTATCAAGGATATGTTTACTTCAGATCTGGAGGTAGCTCGGTTTGAAGGTGCGGCTATCCGAACAGTCAGTGGGATTAGGGGACAGGTTAAGAAGGTTGCAAAAGAAGAGATAGGTAACCAGCCGAAAAGGAAGGGTGGGCAACCCAAAGAAGGAATTGCTAGGTGCACTTTTGAAGACAAAATTCTAATGAGTGACATTGTTTTTCTGCGAGCATGGACTCAAGTTGAAGTTCCTCAGTTTTATAATCCATTGACAACATCACTGCAGCCTCGTGACCAGACCTGGAAAGGAATGAGAACTGTTGCAGAATTGAGAAGAGAACACAATCTTCCTATACCTGTAAACAAGGATTCTCTTTACAAGAAAATTGAAAGGAAACCTAGAAAGTTCAATCCATTGGTGATTCCCAAGTCTCTACAGGCAAATCTTCCTTTTGAATCAAAACCTAAGCATTTTCTACCCACGCGAAAAAAGCCTTTGCTGGAAGAGAGAAGGCAAAAGGGTGTTGTCATGGAACCTCGTGAGCGTAAAATTCGTGCTCTTGTTCAGCATCTTCAGTTAATGAAAAGCGAAAAGAGTAAAAAGCGGAAGATTAAGGAAGTGGGGAAGAGAAAAGTTCTTGAAGCAGAGCGAGAAAAAGAGGAGCAGTTGTCAAAAAAGCGCCGGAGAGAGGAAAGACGAGACAAATACAGGACAGAAGACAAGCTCAATAAGAAAATTAGGAGAGCATGA 3594 0.3959 MAVNDADQSHKAHRTRQAGPKKKIKSKKKHDDEAEDQKMLNPKAFAYSSSKKVKRLQSRSVEKEQRRLHVPIIDRTYGEPPPFVIVVQGPPQVGKSLLIKTLIKHYTKQNLPEVRGPITIVSGKQRRLQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFKDVKKLRKTKKLLKNRFATEMYAGAKLFYLSGLIHGKYVKREVHNLAKFISVMKFHPLSWRTSHPYVLVDRFEDITPPEKVHANNKCDRKVTLYGYLRGCNLKKGNKVHIAGVGDYGLAHVTGLPDPCPLPSAAKKKGLRDKEKLFYAPMSGIGDLLYDKDAVYININDHFVQFSKVDDENSAMTSKGKDRDVGEVLVRSLQNIQHSINEKLENSSINLFGQKPKVPSEALGDAQGTNKDVEQDGKLETLDKYQPVDSDGSESSDQDEDGDATDSEAINRDHIKEQIEFHNGRQRRKAIFGSDADQSDLMDSGEEEEEEEEEEEEEEEEEEDGAANDCGASSDSESSEEDEDDNNDDDTHEDDMGNVSKWKESLADRSLARKPPSLMQLVYGDNSTSMNKGNDSSEDEENEGDFFMPKELIKQNIRDGLDDRMVDAEDCSKCAQLMSQKWDEKDNEEIRNRFVSGNLAKAALRNALQKDNTEEESEDVFGDFEDLEAGEQYELYQTEDGFALTTNKGVDLEAEQRRLKKLAKRAEFDAQQYGDDRETPEEDTGNENEDKVHHDQPKESNYFDRLKEEIELRKQMNIAELNDLDEDTRLEVEGFRTGTYLRLEVHDVPCEMVEHFDPYHPILVGGVGLGEENVGYMQARLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPIYAIEDHNGRHRMLKYTPEHMHCLAMFWGPLAPPNTGIVAVQSLSNNQANFRITATAVVLEFNHAARIVKKIKLVGHPCKIFKKTALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKVAKEEIGNQPKRKGGQPKEGIARCTFEDKILMSDIVFLRAWTQVEVPQFYNPLTTSLQPRDQTWKGMRTVAELRREHNLPIPVNKDSLYKKIERKPRKFNPLVIPKSLQANLPFESKPKHFLPTRKKPLLEERRQKGVVMEPRERKIRALVQHLQLMKSEKSKKRKIKEVGKRKVLEAEREKEEQLSKKRRREERRDKYRTEDKLNKKIRRA 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03709 1197 MobiDBLite consensus disorder prediction 532 549 - -
Car06g03709 1197 ProSiteProfiles Bms1-type guanine nucleotide-binding (G) domain profile. 80 245 IPR030387 -
Car06g03709 1197 SMART aarp2cn2 231 317 IPR012948 GO:0005634|GO:0042254
Car06g03709 1197 CDD BMS1 44 273 IPR037875 GO:0005525
Car06g03709 1197 MobiDBLite consensus disorder prediction 1163 1197 - -
Car06g03709 1197 Coils Coil 709 729 - -
Car06g03709 1197 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 213 IPR027417 -
Car06g03709 1197 Pfam AARP2CN (NUC121) domain 231 316 IPR012948 GO:0005634|GO:0042254
Car06g03709 1197 MobiDBLite consensus disorder prediction 497 525 - -
Car06g03709 1197 SMART DUF663_2 706 1029 IPR007034 -
Car06g03709 1197 Coils Coil 495 526 - -
Car06g03709 1197 MobiDBLite consensus disorder prediction 550 567 - -
Car06g03709 1197 MobiDBLite consensus disorder prediction 462 491 - -
Car06g03709 1197 Coils Coil 1158 1181 - -
Car06g03709 1197 MobiDBLite consensus disorder prediction 428 444 - -
Car06g03709 1197 MobiDBLite consensus disorder prediction 412 605 - -
Car06g03709 1197 Gene3D - 83 245 IPR027417 -
Car06g03709 1197 PANTHER RIBOSOME BIOGENESIS PROTEIN 1 1190 IPR039761 GO:0042254
Car06g03709 1197 PANTHER BNAC08G44910D PROTEIN 1 1190 - -
Car06g03709 1197 MobiDBLite consensus disorder prediction 1 44 - -
Car06g03709 1197 Pfam 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal 737 1030 IPR007034 -
Car06g03709 1197 MobiDBLite consensus disorder prediction 726 757 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03709 K14569 - gmx:100810906 1795.4