Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03703 ATGGGAAACACAATTATTCATCTCTTGCTTTTCCTTCTACTAACTTTTCCTTCTTCCTTTGCCGAGCTCTTTTTTGAAGAGAGATTCCAAGATGGGTGGAAGAGTCGTTGGGTGTTGTCTGATTGGAAAAGAAGTGAAGGAAAAGCAGGTACCTTTAAATACACTGCTGGAAAATGGCCTGGAGATCCTGATGACAAAGGTATTCAGACATATAATGATGCCAAGCATTTTTCCATATCTGCAAAGATACCAGAGTTGACCAATAAGAACAGAACCCTGGTGGTTCAGTATTCTATTAAATTTGAGCAGGATATTGAGTGTGGTGGTGGTTACATCAAACTTCTTTCTGGTTATGTAAATCAGAAAAAGTTTGGCGGTGATACTCCTTATAGTTTGATGTTTGGACCGGATCTATGTGGCACACAGACAAAGAAGCTCCATGTTATATTGTCATACCAAGGGCAGAATTATCCTATTAGAAAGGACCTGCAGTGCGAAACTGACAAATTAACTCATTTTTATACGTTCATTCTAAGGCCTGATGCCTCCTATAGTGTCCTTGTCGATAATCGAGAAAGAGATTCTGGAAGCATGTACACAGATTGGGACATCCTTCCTCCAAGAAAAATCAAGGATGTCAATGCAAAAAAGCCAGCAGACTGGGACGATAGAGAGTACATTGAGGATTCTAATGATGTCAAACCAGAGGGATATGACTCAATTCCGGCTGAAATTCCTGATCCAAAAGCCAAGAAGCCTGTTGACTGGGATGATGAAGATGATGGACTATGGAAGTCCCCAAAAATTCCTAATCCAGCATACAGAGGAACGTGGAAACGAAAGAAAGTCAAGAACTCTAATTACAAGGGAAAGTGGAAGACTCCGTGGATTGATAACCCAGAATTTGAGGATGATCCTGATCTTTATGTGCTGAAACCAATAAAGTATGTCGGCATTGAAGTGTGGCAGGTGAAAGCTGGTTCGATTTATGACAACATCTTAATTTGTGATGACCCACAATATGCAAAGCAAGTTGTGGAAGAATTTTTGGTTAATAATAGAGAGGCTGAAAAAGAAGCTTTTGAAGAAGCGGAAAAAGAAAGAAGGGCTCGGGAAGAAGAGGAGGCACaaagagcaagagaagagggtgaaaagagaaggagagagagGGACCGCAATTATGGAGATAAGAGGCGCCGTAGAAGAAGGCCGGATCCCCACGAATACCTGGATGATTATGGTCATGATGAGCTTTGA 1257 0.3986 MGNTIIHLLLFLLLTFPSSFAELFFEERFQDGWKSRWVLSDWKRSEGKAGTFKYTAGKWPGDPDDKGIQTYNDAKHFSISAKIPELTNKNRTLVVQYSIKFEQDIECGGGYIKLLSGYVNQKKFGGDTPYSLMFGPDLCGTQTKKLHVILSYQGQNYPIRKDLQCETDKLTHFYTFILRPDASYSVLVDNRERDSGSMYTDWDILPPRKIKDVNAKKPADWDDREYIEDSNDVKPEGYDSIPAEIPDPKAKKPVDWDDEDDGLWKSPKIPNPAYRGTWKRKKVKNSNYKGKWKTPWIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSIYDNILICDDPQYAKQVVEEFLVNNREAEKEAFEEAEKERRAREEEEAQRAREEGEKRRRERDRNYGDKRRRRRRPDPHEYLDDYGHDEL 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03703 418 ProSitePatterns Calreticulin family signature 1. 100 115 IPR018124 GO:0005509
Car06g03703 418 Pfam Calreticulin family 262 335 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Car06g03703 418 Pfam Calreticulin family 25 260 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Car06g03703 418 PIRSF Calreticulin 1 410 IPR009169 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Car06g03703 418 PANTHER CALRETICULIN AND CALNEXIN 6 418 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Car06g03703 418 Gene3D Calreticulin/calnexin, P domain 207 308 IPR009033 GO:0005509|GO:0005515
Car06g03703 418 ProSitePatterns Calreticulin family signature 2. 132 140 IPR018124 GO:0005509
Car06g03703 418 SUPERFAMILY Concanavalin A-like lectins/glucanases 17 220 IPR013320 -
Car06g03703 418 MobiDBLite consensus disorder prediction 245 262 - -
Car06g03703 418 Gene3D - 23 378 - -
Car06g03703 418 SUPERFAMILY P-domain of calnexin/calreticulin 203 318 IPR009033 GO:0005509|GO:0005515
Car06g03703 418 Coils Coil 347 391 - -
Car06g03703 418 MobiDBLite consensus disorder prediction 221 235 - -
Car06g03703 418 PANTHER CALRETICULIN-3 6 418 - -
Car06g03703 418 MobiDBLite consensus disorder prediction 360 418 - -
Car06g03703 418 MobiDBLite consensus disorder prediction 360 391 - -
Car06g03703 418 MobiDBLite consensus disorder prediction 401 418 - -
Car06g03703 418 MobiDBLite consensus disorder prediction 221 262 - -
Car06g03703 418 PRINTS Calreticulin signature 128 144 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Car06g03703 418 PRINTS Calreticulin signature 102 120 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Car06g03703 418 PRINTS Calreticulin signature 316 336 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Car06g03703 418 PRINTS Calreticulin signature 217 230 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Car06g03703 418 PRINTS Calreticulin signature 283 302 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Car06g03703 418 PRINTS Calreticulin signature 245 267 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03703 Car-Chr6 68768441 68774088 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03703 10 343 Miscellaneous Gene Families AT5G61790 34.518 4.53e-62 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03703 K08057 - gmx:100802428 698.738