Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03675 ATGATTACTATGGCCAATAATATGTTTGCTCTATTTGTTGTGATATCATTAACATTTGCTTTCACAAATGCAGAAGATCCTCTTCTTGAAATCGGTAACCTCACTCGGAAAAGTTTCCCTGCTGGATTCATTTTTGGGGCAGGGGGATCAGCATACCAATATGAAGGTGCGGCGAATGAAGGTGGTAAAGGACCAAGTATTTGGGATACCTATACTCATAATCATCCAGAAAGAATAGCGGATGGAAGCAATGGAGACGTCGCCATTGATCAATACCACCGTTATAAGGAAGATGTGCAAATTATAAAAGATTTGAATATGGATTCGTACAGATTCTCAATCTCTTGGTCGAGAATACTCCCAAAAGGAAAGTTGAGCGGAGGAAAAAATCCCGAAGGAATACAATATTACAACAACCTCATCAATGAATCGTTGGCTCATGGTATAAAACCATATATAACTCTTTTTCATTGGGATCTTCCTCAAGCTTTGGAAGACGAGTATGGTGGTTTCTTAAACTCTAGCATAATAAATGATTTTCGAGACTATGCGGATCTTTGTTTCCACGAATTTGGAGATAGAGTGAAGGATTGGGTTACTTTCAACGAGCCATGGATGTTTAGCAACGGTGGTTATGCAGTTGGATCACTGGCACCAGGTCGATGTTCGGATCCAACGTGTCTAGGTGGAAATTCTGGCACAGAACCTTATACAGTTACACACAACCAAATTCTTGCTCATGCACATGCCGTGCGAGTGTATAGAACCAAATATAAGGCAAAACAAAATGGTAAAATTGGTATAACGTTGGTAAGTAACTGGTTCTTACCACTCAGAGATAATGTAGAAGATGAATTGGCTACGAGGAGAGCTCTTGACTTCCAATTAGGATGGTTTATGGAACCATTAACAACTGGAAATTATTCTTTAAGCATGCAAAATATTGTGAAAACTCGATTGCCGAAATTCACTACAGAGCAATCACGTCTAGTCAATGGTTCTTTTGATTTTCTTGGCTTAAACTATTACACTTCTACTTATATTAGTAATGCACCCCCTCAAGAGAATGTGCCACCTAGTTACACAACAGATTCTAGAACTAATACTTCATCTGAAAAAAATGGGAGACCTCTAGGCCCAAGGGCTGCTTCAAGTTGGTTATATGTTTATCCAAGGGGACTTCGAGATCTTTTGTTACATATTAAGGAGAAATACAACAATCCTGCAATTTACATCCATGAAAATGGTATGGATGAATTTAATGATCCAACACTTCCAGTAAAAGAAGCTCTTTTGGATACTTTTAGAATTGATTATTATTTTCGTCATCTCTACTACATTCGTTCTGCAATTCAGCTTGGCGCAAACGTTAAGGCATTCTTGGCTTGGTCACTTTTTGACAATTTTGAATGGGGTGGTGGCTATCAACATCGGTTTGGATTAAACTATATAGATTACAAAGATGGATTAAAAAGATATCCAAAGGTTTCTGCACAATGGTACCAGAACTTTCTCAAAAGAGACTAG 1527 0.3824 MITMANNMFALFVVISLTFAFTNAEDPLLEIGNLTRKSFPAGFIFGAGGSAYQYEGAANEGGKGPSIWDTYTHNHPERIADGSNGDVAIDQYHRYKEDVQIIKDLNMDSYRFSISWSRILPKGKLSGGKNPEGIQYYNNLINESLAHGIKPYITLFHWDLPQALEDEYGGFLNSSIINDFRDYADLCFHEFGDRVKDWVTFNEPWMFSNGGYAVGSLAPGRCSDPTCLGGNSGTEPYTVTHNQILAHAHAVRVYRTKYKAKQNGKIGITLVSNWFLPLRDNVEDELATRRALDFQLGWFMEPLTTGNYSLSMQNIVKTRLPKFTTEQSRLVNGSFDFLGLNYYTSTYISNAPPQENVPPSYTTDSRTNTSSEKNGRPLGPRAASSWLYVYPRGLRDLLLHIKEKYNNPAIYIHENGMDEFNDPTLPVKEALLDTFRIDYYFRHLYYIRSAIQLGANVKAFLAWSLFDNFEWGGGYQHRFGLNYIDYKDGLKRYPKVSAQWYQNFLKRD 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03675 508 SUPERFAMILY (Trans)glycosidases 29 506 IPR017853 -
Car06g03675 508 MobiDBLite consensus disorder prediction 351 378 - -
Car06g03675 508 PRINTS Glycosyl hydrolase family 1 signature 334 348 IPR001360 GO:0004553|GO:0005975
Car06g03675 508 PRINTS Glycosyl hydrolase family 1 signature 410 418 IPR001360 GO:0004553|GO:0005975
Car06g03675 508 PRINTS Glycosyl hydrolase family 1 signature 433 444 IPR001360 GO:0004553|GO:0005975
Car06g03675 508 PRINTS Glycosyl hydrolase family 1 signature 454 471 IPR001360 GO:0004553|GO:0005975
Car06g03675 508 PRINTS Glycosyl hydrolase family 1 signature 478 490 IPR001360 GO:0004553|GO:0005975
Car06g03675 508 PANTHER GLYCOSYL HYDROLASE 5 508 IPR001360 GO:0004553|GO:0005975
Car06g03675 508 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 5 508 - -
Car06g03675 508 Pfam Glycosyl hydrolase family 1 36 507 IPR001360 GO:0004553|GO:0005975
Car06g03675 508 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 43 57 IPR033132 -
Car06g03675 508 MobiDBLite consensus disorder prediction 351 375 - -
Car06g03675 508 Gene3D Glycosidases 26 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03675 Car-Chr6 68426235 68431962 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03675 4 505 Glycoside Hydrolase AT5G44640 53.254 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03675 - K01188 gmx:778162 753.051