Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03672 ATGATATTATTCAACGGCTATTTCACTATGACTAATATGCTTGCTATATTTGTTGTAGTAACTTCATTCACATTTGTTTTCACAAATGCAGAAGATCCTCTTCTTGAAATTGGTGACCTTGATCGATACAGTTTCCCTAAGGGCTTCGTTTTTGGGGCAGGATCATCAGCATACCAATTTGAAGGTGCATGGAACGAAAGTGGCAAAGGACTAAGTATCTGGGATACTTTCACCCATAATCATCCAGAAAAAATAAGGGATGGAAGTAATGCAGACCTCACTGTTGACCAATATCACCGCTATAAGGAAGATGTGAAAATTATGAAAGACATAAATCTGGATTCGTACAGATTTTCAATCTCTTGGCCAAGACTCCTCCCAAAGGGAAAGTTGAGCGGAGGCATAAATTGGGAAGGAGTACAATATTACAACAATCTCATCAATGAACTGTTGGCTCATGGTATAGAACCTTTTGTAACTCTTTTTCATTGGGATGTACCACAAGTCTTAGAAGATGAATATGGTGGTTTCTTAAGTTCTCGCATTCAAAATGATTTTCGAGACTATGCGGATCTTTGTTTCAAAGAATTTGGAGATAGAGTGAAGAATTGGGTTACTTTGAATGAGCCATGGTTATTTAGTAATGGAGGTTATGCAATAGGAACAACAGCACCAGGTCGTTGTTCGACCAATGCGCAGTGTCTAGGTGGTGATTCTGGCACAGAACCCTATATAGTTACACACAACCAAATTCTTGCTCATGCAAAAGCTGTAAATGTGTATAAGACCAAGTATCAGGCATATCAAAAGGGAAAGATTGGTATAACGTTGGTTACAAACTGGTTCATAGCACTCGGAGACAAAAGCATACCCGATCAAGAGGCTGCAAAGAGATCACTTGATTTCCAATTTGGATGGTTTATGGAACCACTAACAACTGGAGACTATTCTGTAAGCATGCGAAACATTGTGAAAAATCGATTACCTAAATTCTCTCCACGACAATCAGTTCTAGTCAAGGGTTCATTTGATTTTCTTGGCCTAAACTATTATTCTTCTAGCTATATTAATAATGCACCTCCCAAAGCTAATGCAAAACCTACTTACACAACCGATGCTATGTCAAATACTTCATTTGAAAAACATGGGATACCCCTAGGTCCAAGGGCTGCTTCGGTTTGGATATACGTTTATCCAAGAGGACTTCGAGATCTTTTATTATATATCAAGGATAAATACAACAATCCCGAAGTTTACATCACTGAAAATGGTATGAATGAATTCAACGATGCAACACTTCCAGTGAAAGAAGCTATTTTGGATACTTACAGAATTGATTATTATTATCGTCATTTCTACTACATACGTTCTGCAATAAAGTCCGGCTCAAACGTTAAGGGATTTTTCGCTTGGTCATTTTTGGACTGTAACGAATGGTTTGCAGGCTTTACTGTTCGGTTTGGATTAACCTTTGTAGATTATAAAGATGGATTAAAAAGGTACCCAAAACTTTCTGCAAAATGGTACAAGAACTTTCTCAAAAAGAACTTGCATTAA 1557 0.3757 MILFNGYFTMTNMLAIFVVVTSFTFVFTNAEDPLLEIGDLDRYSFPKGFVFGAGSSAYQFEGAWNESGKGLSIWDTFTHNHPEKIRDGSNADLTVDQYHRYKEDVKIMKDINLDSYRFSISWPRLLPKGKLSGGINWEGVQYYNNLINELLAHGIEPFVTLFHWDVPQVLEDEYGGFLSSRIQNDFRDYADLCFKEFGDRVKNWVTLNEPWLFSNGGYAIGTTAPGRCSTNAQCLGGDSGTEPYIVTHNQILAHAKAVNVYKTKYQAYQKGKIGITLVTNWFIALGDKSIPDQEAAKRSLDFQFGWFMEPLTTGDYSVSMRNIVKNRLPKFSPRQSVLVKGSFDFLGLNYYSSSYINNAPPKANAKPTYTTDAMSNTSFEKHGIPLGPRAASVWIYVYPRGLRDLLLYIKDKYNNPEVYITENGMNEFNDATLPVKEAILDTYRIDYYYRHFYYIRSAIKSGSNVKGFFAWSFLDCNEWFAGFTVRFGLTFVDYKDGLKRYPKLSAKWYKNFLKKNLH 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03672 518 PANTHER GLYCOSYL HYDROLASE 4 516 IPR001360 GO:0004553|GO:0005975
Car06g03672 518 ProSitePatterns Glycosyl hydrolases family 1 active site. 418 426 IPR018120 -
Car06g03672 518 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 4 516 - -
Car06g03672 518 Pfam Glycosyl hydrolase family 1 44 516 IPR001360 GO:0004553|GO:0005975
Car06g03672 518 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 49 63 IPR033132 -
Car06g03672 518 Gene3D Glycosidases 29 515 - -
Car06g03672 518 SUPERFAMILY (Trans)glycosidases 37 514 IPR017853 -
Car06g03672 518 PRINTS Glycosyl hydrolase family 1 signature 342 356 IPR001360 GO:0004553|GO:0005975
Car06g03672 518 PRINTS Glycosyl hydrolase family 1 signature 418 426 IPR001360 GO:0004553|GO:0005975
Car06g03672 518 PRINTS Glycosyl hydrolase family 1 signature 441 452 IPR001360 GO:0004553|GO:0005975
Car06g03672 518 PRINTS Glycosyl hydrolase family 1 signature 462 479 IPR001360 GO:0004553|GO:0005975
Car06g03672 518 PRINTS Glycosyl hydrolase family 1 signature 486 498 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03672 Car-Chr6 68242153 68249335 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03672 14 515 Glycoside Hydrolase AT5G44640 52.871 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03672 - K01188 gmx:778162 784.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03672 06 68242153 68249335 Car06g03672 06 68242153 68249335 ECH