Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03670 ATGACATTCAAAAGCAATATCACTATGGCCAATATGATTGCTCTATTTGTTGTTCTAAGCTCATTCACATTTGCTTTAACAAATGCAGATCCTCTTCTTGATTTCGGTGACCTTGATCGATACAGTTTCCCTCCTGGCTTCATTTTTGGAGCGGGATCATCATCATACCAAGTTGAAGGTGCAACGTTCGAAGATGGTAAAGGAGAAAGTATATGGGATAACTATACTCATAGTCATCCAGAAAGAATACTCGATGGAAGTAATGCAGACGTCACTGTTGATCAATATCACCGCTACAAGGAGGATATTGCAATAATGAAAGCTATGAATATGGATTCCTACAGATTCTCAATCTCTTGGTCAAGAATACTCCCAAAGGGAAAGTTGGACGGAGGCCGTGGTATCAATCCTGATGGAATAAAATATTACAACAACCTCATCAATGAACTCATTGCAAATGAGATAGAACCATTTGTAACACTTTTTCATTGGGATCTTCCTCAAGCTTTAGAAGATGAGTACGGTGGTTTCTTAAGTTCTCAGATAATCGATGATTTTCGAGATTATGCGGATCTTTGTTTCACCGAATTTGGAGATAGAGTGAAGTATTGGGCTACCATAAATGAGCCATGGTTTTTTAGTAATGGTGGTTATGCAATGGGAACAACAGCACCAGGTCGATGTTCGACCAATCCGGGATGTCTTGGTGGTGATTCTGGTACAGAACCTTATATAGTTACACACAATCAACTTCTTGCTCATGGAGAAGCTGTAAATGTGTATAGGACCAAATATCAGGAAGATCAAAAGGGCAAGATAGGCATAACACTTGTAACTAACTGGTTCATTCCACTTGGAGACAATAGCATACCCGATCTAAAGGCTAGTGAGAGAGCAATGGATTTCCAATTTGGATGGTTTATGGAACCACTAACAACTGGGGATTATTCTAAGAGCATGCGAGACATTGTGAAAAATCGTTTGCCTACGTTCAAACCAGAGGAATCACTTCTAGTCAAGGATTCATTTGATTTTATTGGCTTAAACTATTACTCTTCTAGCTATATTAATAATGTTCCTCCAAATGCCACTGCACCACCTAGTTACACAACAGATCCTATGACCAATACTTCATTTGAAAAAAATGGAAGACCCCTAGGTCAAAGGGCTGCTTCATTTTGGATATATGTTTATCCAATTGGACTTCGAGATCTTTTGATGTACATCAAGGAGAAATACAACAATCCAGTGATTTACATCCATGAAAATGGTATGAATGAATTCAATGATCCAACACTTCCGATAGAAGAAGCCGTTTTAGATACTTACAGAATTGATTATTACTATCGTCACTTCTACTACATGAAGTCAGCAATCGATGCCGGTGCAAATGTTAAGGGATATTATGCTTGGTCACTATTGGACAGTTTCGAATGGTTTAATGGCTATACTGTTCGATTTGGATTCTACTTTGTTGATTACAATGATGGATTAAAAAGGTACCAAAAGCTTTCTGCCAATTGGTACAGATATTTCCTTGAAAGGCGCAAGCATCAGTCCTATCGTTGA 1569 0.3837 MTFKSNITMANMIALFVVLSSFTFALTNADPLLDFGDLDRYSFPPGFIFGAGSSSYQVEGATFEDGKGESIWDNYTHSHPERILDGSNADVTVDQYHRYKEDIAIMKAMNMDSYRFSISWSRILPKGKLDGGRGINPDGIKYYNNLINELIANEIEPFVTLFHWDLPQALEDEYGGFLSSQIIDDFRDYADLCFTEFGDRVKYWATINEPWFFSNGGYAMGTTAPGRCSTNPGCLGGDSGTEPYIVTHNQLLAHGEAVNVYRTKYQEDQKGKIGITLVTNWFIPLGDNSIPDLKASERAMDFQFGWFMEPLTTGDYSKSMRDIVKNRLPTFKPEESLLVKDSFDFIGLNYYSSSYINNVPPNATAPPSYTTDPMTNTSFEKNGRPLGQRAASFWIYVYPIGLRDLLMYIKEKYNNPVIYIHENGMNEFNDPTLPIEEAVLDTYRIDYYYRHFYYMKSAIDAGANVKGYYAWSLLDSFEWFNGYTVRFGFYFVDYNDGLKRYQKLSANWYRYFLERRKHQSYR 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03670 522 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 10 515 - -
Car06g03670 522 Pfam Glycosyl hydrolase family 1 42 516 IPR001360 GO:0004553|GO:0005975
Car06g03670 522 SUPERFAMILY (Trans)glycosidases 33 514 IPR017853 -
Car06g03670 522 PRINTS Glycosyl hydrolase family 1 signature 486 498 IPR001360 GO:0004553|GO:0005975
Car06g03670 522 PRINTS Glycosyl hydrolase family 1 signature 342 356 IPR001360 GO:0004553|GO:0005975
Car06g03670 522 PRINTS Glycosyl hydrolase family 1 signature 441 452 IPR001360 GO:0004553|GO:0005975
Car06g03670 522 PRINTS Glycosyl hydrolase family 1 signature 462 479 IPR001360 GO:0004553|GO:0005975
Car06g03670 522 PRINTS Glycosyl hydrolase family 1 signature 418 426 IPR001360 GO:0004553|GO:0005975
Car06g03670 522 PANTHER GLYCOSYL HYDROLASE 10 515 IPR001360 GO:0004553|GO:0005975
Car06g03670 522 Gene3D Glycosidases 28 515 - -
Car06g03670 522 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 47 61 IPR033132 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03670 Car-Chr6 68198130 68206478 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03670 38 518 Glycoside Hydrolase AT5G44640 53.512 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03670 - K01188 gmx:778162 731.48