Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03669 ATGGCATTAAACATTATATATTTCCTATTTTCTCTCTTGCCTTTAATTTTCTCATTCACAAAAGGTGATGTAACGCAGCTAGCTTCATTGAATAGAAACAGTTTCCCTGATGGCTTCATCTTTGGTACAGCATCTTCTGCATACCAATTTGAAGGTGCATCAAACGAAGGTGGAAGAGGACCAAGTATTTGGGATACATTCACTCATAAATTTCCAGATAAAATAAAGGATGGGAAAAATGGTGACGTGGCAGTTGACTCGTATCATCGCTATAAGGAAGATGTTGCGATTATGAAGGATATGAACTTGGATGCATATAGATTTTCCATATCTTGGTCTAGAATACTCCCAAAAGGAAAACTAAGTGGAGGAATCAATCAAGAAGGAATCGACTATTATAACAACCTCATCGATGAATTGCTGGCAAATGGTTTACAACCATTTGTAACTCTTTTTCATTGGGATCTTCCTCAAGCGCTAGAAGATGAATATGGTGGCTTCTTAAGCCCTCTCATCATAAAAGACTTTCAAGATTACGCAGAACTTTGTTTTAAAACATTTGGAGATAGAGTAAAATATTGGATAACTTTAAATGAGCCATGGACTTACAGTAGAGATGGATATGCGAACGGTGACATGGCACCAGGTCGATGTTCTTCTTGGTTGAACCCAAATTGCACTGGTGGAGATTCTGGAACAGAACCATATTTAGTTTCACACTATCAACTTCTAGCTCATGCAGCAGCGGTTAATGTGTATAAGACCAAATATCAGGACTCTCAAAATGGTATGATTGGTATAACATTGGTCATTAACTGGTTTGTGCCACTCTCGAAAAATATATTTAATCAAAAAGCTGCCGAAAGAGCTATAGACTTTATGTTTGGATGGTTTATGGATCCTCTAAGTAATGGAGATTATCCCAAAACCATGCGAGCATTGGTTGGAGCACGGTTACCAAAGTTTACTAAAGAGCAATCTAAACTAGTGAGTGGTTCGTTTGATTTTATTGGCATAAACTATTATTCTTCTTGCTATGCTTCTGATGCACCTCAACTAAGAAATGCCAAAGATAACTACCTCACAGATTCTCTTTCTCAATTTTCATTCGCAAGCAATGGAAAACCCATTGGCCTTAATGTTGCTTCAGATTGGTTGTATGTTTATCCTAAAGGAATTCGAGACTTTTTGATATATACTAAAAAAAAATACAACAATCCTTTAATTTATATCACCGAAAATGGTATAAATGAGTACGATGATCCATCATTATCACTTCAAGAATCTCTTTTAGATTCCTACAGAATTGATTATCATTATCGTCATCTCTTTTATCTTAGAGCTGCAATTGAAGCTGGTGTAAATGTTAAGGGATACTTTGCATGGTCTTTGTTGGATAATTTTGAATGGCACATGGGTTACACTGTGAGATTTGGAATGACCTTTATAGATTACAAAAATGATTTAAAAAGACATCAAAAGCTCTCAGGATTATGGTTCAAGAATTTTCTCACATCAGACATCAAACTTTACGGACATTCTATTTAA 1548 0.3572 MALNIIYFLFSLLPLIFSFTKGDVTQLASLNRNSFPDGFIFGTASSAYQFEGASNEGGRGPSIWDTFTHKFPDKIKDGKNGDVAVDSYHRYKEDVAIMKDMNLDAYRFSISWSRILPKGKLSGGINQEGIDYYNNLIDELLANGLQPFVTLFHWDLPQALEDEYGGFLSPLIIKDFQDYAELCFKTFGDRVKYWITLNEPWTYSRDGYANGDMAPGRCSSWLNPNCTGGDSGTEPYLVSHYQLLAHAAAVNVYKTKYQDSQNGMIGITLVINWFVPLSKNIFNQKAAERAIDFMFGWFMDPLSNGDYPKTMRALVGARLPKFTKEQSKLVSGSFDFIGINYYSSCYASDAPQLRNAKDNYLTDSLSQFSFASNGKPIGLNVASDWLYVYPKGIRDFLIYTKKKYNNPLIYITENGINEYDDPSLSLQESLLDSYRIDYHYRHLFYLRAAIEAGVNVKGYFAWSLLDNFEWHMGYTVRFGMTFIDYKNDLKRHQKLSGLWFKNFLTSDIKLYGHSI 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03669 515 SUPERFAMILY (Trans)glycosidases 28 505 IPR017853 -
Car06g03669 515 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 22 510 - -
Car06g03669 515 PANTHER GLYCOSYL HYDROLASE 22 510 IPR001360 GO:0004553|GO:0005975
Car06g03669 515 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 39 53 IPR033132 -
Car06g03669 515 Gene3D Glycosidases 19 505 - -
Car06g03669 515 PRINTS Glycosyl hydrolase family 1 signature 333 347 IPR001360 GO:0004553|GO:0005975
Car06g03669 515 PRINTS Glycosyl hydrolase family 1 signature 409 417 IPR001360 GO:0004553|GO:0005975
Car06g03669 515 PRINTS Glycosyl hydrolase family 1 signature 432 443 IPR001360 GO:0004553|GO:0005975
Car06g03669 515 PRINTS Glycosyl hydrolase family 1 signature 453 470 IPR001360 GO:0004553|GO:0005975
Car06g03669 515 PRINTS Glycosyl hydrolase family 1 signature 477 489 IPR001360 GO:0004553|GO:0005975
Car06g03669 515 ProSitePatterns Glycosyl hydrolases family 1 active site. 409 417 IPR018120 -
Car06g03669 515 Pfam Glycosyl hydrolase family 1 32 506 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03669 Car-Chr6 68175465 68178927 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03669 10 505 Glycoside Hydrolase AT5G44640 53.984 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03669 - K01188 gmx:100792870 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03669 06 68175465 68178927 Car06g03669 06 68175465 68178927 ECH