Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03666 ATGGCATTCAATAGCTATCTATATCTCCTCTACCTTGGTGTCTTGACTCTTATTATTATCTCTTCTGTTACAGAAATCACTGAAGCTGTTACTCCTACACTTGTTGATAATGCTTCTCTAAACCGTAATAGTTTTCCCCCAGGTTTCATTTTTGGTACTGCATCCTCCTCCTACCAGTACGAAGGAGCTGCGAATGAAGGTGGAAGAGGACAATGTATATGGGATTACTATACTCATAAACACCCAGAGAGAATAATGGATAGAAGCAATGGAGATGTAGCAGTTGATCAGTATCACCGTTATAAGGAAGATGTTGCAATCATGAAGCATATGAATACAGATGCATACAGATTCTCCATCTCTTGGTCAAGGATATTGCCAAAAGGAAAAGTAAATGCAGGTATAAACCAAGAAGGAATCAAATATTACAACAACCTGATCAATGAGCTACTTGATAATGGTCTGATACCATTCGTGACTCTTTTGCATTTGGATCTTCCCCAAGCCTTAGAAGACAAGTATGGTGGTTTCTTGAGCCCTGATATCATAAATGATTTCCAAGACTATGCAGAGTTATGCTTCAAGGAATTTGGAGACAGAGTGAAACATTGGATTACTCTTAATGAGCCATTCTCTTACAGTATGAGTACAGAACCTTACATGGCTTCTCACAACCAACTCCTTGCTCATGCAGCTGCTGTCAAAATGTATAAAACCAATTATCAGGCGTCTCAAAATGGTTCAATAGGCATCACCTTAAATTGTCACTGGTTTTTGCCATTCTCAAATGATATATTAGATCAACAAGCTGCCCTACGTGCTCTTGATTTCATGTTTGGATGGTTTATGCAGCCAATGACAACAGGAAATTATCCATCAACCATGGTGTCTTTTGTGGGAAACAAATTGCCAAAGTTCACTGAAGAGCAATCCAAGATGCTTATTGGCTCATTTGATTTTATTGGAATCAATTACTACACTGCCAATTATGCTGCCAATATACCCCTTTCAAATAATGACACAAGCAAACCTAGCTATCTCAAGGATAGTCATCTCAATTTAACAACTGAACGTAACGGGATACCAATTGGACCAAGGGCTGCTTCACCTTGGCTATTTGTTTATCCAAGGGGGATTCAAGAACTACTATTGTACATAAAGACAAACTATAACAACCCTTTGATTTACATAACAGAAAATGGCATTGACGAGATCAATGATCCAACACTACCACTTGAAGAGGCGCTCATGGATACTTATAGAATTGATTACTTTCATCGTCATCTTTATTATATTTCATCTGCAATCAAGCATGGTGTGAAAGTACAAGGATATTTTGCATGGTCACTTTTGGACAACTTTGAATGGATTGCCGGCTACACAGTGCGTTTTGGAATTAACTTCGTTGATTACAGAGATAATCTTAAAAGACACAGAAAGCTCTCTGCTCATTGGTTTAAGAAATTTCTTAAAAAAGACTAA 1482 0.3785 MAFNSYLYLLYLGVLTLIIISSVTEITEAVTPTLVDNASLNRNSFPPGFIFGTASSSYQYEGAANEGGRGQCIWDYYTHKHPERIMDRSNGDVAVDQYHRYKEDVAIMKHMNTDAYRFSISWSRILPKGKVNAGINQEGIKYYNNLINELLDNGLIPFVTLLHLDLPQALEDKYGGFLSPDIINDFQDYAELCFKEFGDRVKHWITLNEPFSYSMSTEPYMASHNQLLAHAAAVKMYKTNYQASQNGSIGITLNCHWFLPFSNDILDQQAALRALDFMFGWFMQPMTTGNYPSTMVSFVGNKLPKFTEEQSKMLIGSFDFIGINYYTANYAANIPLSNNDTSKPSYLKDSHLNLTTERNGIPIGPRAASPWLFVYPRGIQELLLYIKTNYNNPLIYITENGIDEINDPTLPLEEALMDTYRIDYFHRHLYYISSAIKHGVKVQGYFAWSLLDNFEWIAGYTVRFGINFVDYRDNLKRHRKLSAHWFKKFLKKD 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03666 493 Gene3D Glycosidases 25 492 - -
Car06g03666 493 PRINTS Glycosyl hydrolase family 1 signature 317 331 IPR001360 GO:0004553|GO:0005975
Car06g03666 493 PRINTS Glycosyl hydrolase family 1 signature 395 403 IPR001360 GO:0004553|GO:0005975
Car06g03666 493 PRINTS Glycosyl hydrolase family 1 signature 418 429 IPR001360 GO:0004553|GO:0005975
Car06g03666 493 PRINTS Glycosyl hydrolase family 1 signature 439 456 IPR001360 GO:0004553|GO:0005975
Car06g03666 493 PRINTS Glycosyl hydrolase family 1 signature 463 475 IPR001360 GO:0004553|GO:0005975
Car06g03666 493 PANTHER GLYCOSYL HYDROLASE 3 492 IPR001360 GO:0004553|GO:0005975
Car06g03666 493 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 49 63 IPR033132 -
Car06g03666 493 SUPERFAMILY (Trans)glycosidases 32 491 IPR017853 -
Car06g03666 493 Pfam Glycosyl hydrolase family 1 42 492 IPR001360 GO:0004553|GO:0005975
Car06g03666 493 PANTHER BETA-GLUCOSIDASE, PUTATIVE-RELATED 3 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03666 Car-Chr6 68071680 68077490 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03666 11 492 Glycoside Hydrolase AT5G44640 49.312 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03666 - K01188 gmx:100785608 809.675