Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03660 ATGTCGAAAACCACCGCATACGGCGGCGACTCTCCCTCGGAAAACTTTGAGACGCCGACGCTAGACAGGGAGTCTCCCACTCTGCTTCAGTCCATTTCAGAGCACGGTGGATATGCGTACGTGAGAATGGCGGCAGTGGCAGCCTCCGGAGACATTCGCGCAGCGGAGGCGGTTAGGGAGATGGCGTGGGAGCAGCTTCACTCTGGACCGTGGCACTCGGTGTTGCCGGTGTGGCGCGACGCTTACTCGATGGCGTGTCTCCACGTGGCGAAGCACCACTACGGAAACGGTGAGTTGAAGGAAGCGCTTAGGGCTTTGGATATGGGGATTATTATGGGAGGGAGTCTACTTAGGAAGGATTTGGACTCTGCTGTTGATATGGTTTCGGAAAAGGCTAGGATGCTTAGGGTTTCTGATGGAAACAATCAAAGTTTTGGTAATTCTGAGCATCAACTCGTTGATCGTGAATTCGATGTGTCTAAGGTGCTCAAACTTTTACCTGTTAAGTCCCTTGCTTCTAAGCTTGTGGTGAAGAGGTCCGCCCTGTCACTGGAGAAGTTCCTGAAAGATCATTACCTGGCTGGCTCCCCAGTTATCATCAGTGATTGTATGGCGCACTGGCCAGCCAAAAAAAACTGGAATAATATAGATTACTTGCTAAGAGTTGCTGGTGACCGCACTGTTCCGGTTGAGGTTGGGAAAAACTATTTATGTGCAGATTGGAAGCAAGAGCTAGTTACGTTTTCAGAGTTCCTTGAGCGGATAAGGTCGCATGGCTGTTCTCCTGGTGGTCCTACATATCTTGCTCAGCATCCATTATTTGACCAGATAAATGAGCTTCGGAAAGATATCTTTATTCCCGACTATTGTTTTGCTGGTGGAGGGGAGCTAAGATCTCTCAATGCTTGGTTTGGTCCAGCTGGAACAGTAACACCATTACACCATGATCCACATCATAACATACTAGCACAGGTTGTCGGGAAAAAGTACATTCGGCTTTATCCAGCATCTATGTCTGACGAACTTTTTCCCTACTCGGGCACCATGCTTAGCAATTCCAGCCAGGTTGATTTAGATGACATAGATGAAAGCAAGTTTGCTGAGGTGCAAGACTTGGAATTTGTAGACTGTATTTTAGAGGAAGGTGAAATGTTATATATCCCGCCAAAATGGTGGCACTACGTGCGGTCTTTAACTACCAGTTTATCAGTTAGCTTTTGGTGGAGTGAGGGTGAAAGTTCATCTCCGTCCTAA 1254 0.4785 MSKTTAYGGDSPSENFETPTLDRESPTLLQSISEHGGYAYVRMAAVAASGDIRAAEAVREMAWEQLHSGPWHSVLPVWRDAYSMACLHVAKHHYGNGELKEALRALDMGIIMGGSLLRKDLDSAVDMVSEKARMLRVSDGNNQSFGNSEHQLVDREFDVSKVLKLLPVKSLASKLVVKRSALSLEKFLKDHYLAGSPVIISDCMAHWPAKKNWNNIDYLLRVAGDRTVPVEVGKNYLCADWKQELVTFSEFLERIRSHGCSPGGPTYLAQHPLFDQINELRKDIFIPDYCFAGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVGKKYIRLYPASMSDELFPYSGTMLSNSSQVDLDDIDESKFAEVQDLEFVDCILEEGEMLYIPPKWWHYVRSLTTSLSVSFWWSEGESSSPS 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03660 417 MobiDBLite consensus disorder prediction 1 24 - -
Car06g03660 417 SUPERFAMILY Clavaminate synthase-like 180 409 - -
Car06g03660 417 SMART cupin_9 266 414 IPR003347 -
Car06g03660 417 PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED 36 411 - -
Car06g03660 417 Pfam Cupin-like domain 186 410 IPR041667 -
Car06g03660 417 PANTHER - 36 411 - -
Car06g03660 417 Gene3D Cupin 175 409 - -
Car06g03660 417 ProSiteProfiles JmjC domain profile. 275 417 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03660 Car-Chr6 68000591 68006115 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03660 170 408 Acyl Lipid Metabolism Gene Families AT3G45880 25.000 1.62e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03660 K24444 - gmx:100813075 698.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03660 06 68000591 68006115 Car06g03660 06 68000591 68006115 ECH