Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03639 ATGGCTTATCTTTCTCAGTTACATCATTTTCCCACCCCCATCTCTTACTTTACCGTCGCTAAAACCCCAAACCCCATTTTCTCATCTCACAACACTCTTCCTTTTTCCACTTCAATTCTCTCCGCGCTTTCTCACACAAAATCCATTTCACTCGCTCGCCGGAGCATCTCCCGCTCCGTCCCACAATTTAGCACCGGTGAATTATCAGGCACTGTCGATGACGATGAACTACCAGACGAATTGGACCACCACGTCAATTATTCCGACGATGATGACGAAATTGATGTCGTCACGCTCGAGCAAGAAGCAAAGGATGTTGTCCTGGAGTATTCAAACTCTCTATCTCGCGTTTTGAGTATCGATGATGAGAAAAGTGATGTCAAGGAAACAGCTAAAACCTCCAAGAGGAGTAAACAGAAGAAAAAAATTATCCCTGACAATCTTCTCCCAAGGATTGCTATTGTTGGAAGGCCGAACGTTGGAAAGTCAGCATTATTTAATCGTCTCGTTGGGGGAAACAGGGCAATAGTTGTGGATGAACCTGGGGTTACCAGGGATCGTTTATATGGCCGATCATATTGGGGAGAGCATGAATTCATGGTAGTGGACACTGGTGGTGTTCTCACTGTTTCAAAATCACGAACTACTGTTATGAAAGAGCTGGATATTACTACAACCATTGGTATGGATGGTATTCCCCTTGCCTCTAGAGAGGCAGCTGTTGCTAGGATGCCATCGATGATTGAGAAACAAGCGATTGCAGCTGTGGAAGAATCATCTGTTATTATTTTCCTGGTTGATGGTCAGGCAGGTCTAACAGCAGCTGATGTGGAGATTGCTGATTGGCTACGTAAAAACTACTCAAATAAATGTACCATTCTTGCAGTTAACAAGTGCGAATCTCCACGGAAAAGAATTATGCAGGCATCTGAATTTTGGTCCCTTGGGCTTGAACCAATTCCAATATCAGCTATATCAGGGACTGGAACTGGAGAGCTTCTTGACCTTGTTTGTTCAGGGATACAGAAAGTTGAGGAGCCAAATAATCTTGTTGAAGAAGAAGATTATGTTCCTGCAATTTCAATTGTTGGTAGACCAAATGTTGGCAAAAGTAGCATTTTGAATGCACTGGTTGGCGAGGACAGAACAATAGTCAGCCCTATCAGTGGCACTACACGTGATGCTATTGATACAGAATTTATCGGAGCAGATGGCCAGAAGTTCCATCTTATTGATACGGCTGGAATCAGGAAAAGGACAGCTGTAGCCTCAGCTGGAAGTACAACAGAGGCTTTGTCAGTGAATCGAGCATTTCGTGCTATTCGGCGTTCTGATGTTGTTGCTCTTGTCATTGAGGCCATGGCTTGTATCACTGAACAGGACTACAAGATAGCTGAAAGGATAGAAAAAGAAGGGAAAGGTTGTGTGATTGTTGTAAACAAGTGGGATACAATACCAAATAAAAATCAGCAGACTGCATTTCATTATGAACAAGATATCAGAGAGAAGCTTCGTTTACTTGATTGGGCACCAGTTGTTTATTCTACTGCTCTAGCTGGCCAAAGTGTTGAGAAGATTATTGTTGCTGCTAGTGAAGTTGAAAAGGAGAGATCAAGAAGACTGGGTACTTCTATATTGAATCAAGTAGTGCGGGAATCAGTAACTTTTAAGCCTCCTCCCAGGACACGAGGTGGTAAAAGAGGGCGTGTTTACTATTGCACTCAGGCTGCTATAAGGCCTCCTACATTTGTGTTCTTTGTCAATGATGCAAAACTTTTTCCTGAGACTTACCGTCGCTTTATGGAGAAGCAACTGCGGACAAATGCGGGATTTCCTGGTACCCCCATTCGGCTTTTGTGGCGCAGCAGAAGAAAAATGGAAAAAGATGAAGGCAAAATGGTGACAAGGACCAAAGAAAATAATGCGTCACGCCGTCGAAAATTGATAACAACTACACAGTAG 1962 0.4332 MAYLSQLHHFPTPISYFTVAKTPNPIFSSHNTLPFSTSILSALSHTKSISLARRSISRSVPQFSTGELSGTVDDDELPDELDHHVNYSDDDDEIDVVTLEQEAKDVVLEYSNSLSRVLSIDDEKSDVKETAKTSKRSKQKKKIIPDNLLPRIAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRLYGRSYWGEHEFMVVDTGGVLTVSKSRTTVMKELDITTTIGMDGIPLASREAAVARMPSMIEKQAIAAVEESSVIIFLVDGQAGLTAADVEIADWLRKNYSNKCTILAVNKCESPRKRIMQASEFWSLGLEPIPISAISGTGTGELLDLVCSGIQKVEEPNNLVEEEDYVPAISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFIGADGQKFHLIDTAGIRKRTAVASAGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDYKIAERIEKEGKGCVIVVNKWDTIPNKNQQTAFHYEQDIREKLRLLDWAPVVYSTALAGQSVEKIIVAASEVEKERSRRLGTSILNQVVRESVTFKPPPRTRGGKRGRVYYCTQAAIRPPTFVFFVNDAKLFPETYRRFMEKQLRTNAGFPGTPIRLLWRSRRKMEKDEGKMVTRTKENNASRRRKLITTTQ 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03639 653 PANTHER GTPASE DER 129 630 - -
Car06g03639 653 MobiDBLite consensus disorder prediction 627 653 - -
Car06g03639 653 TIGRFAM GTPase_EngA: ribosome-associated GTPase EngA 243 620 IPR016484 GO:0005525
Car06g03639 653 Hamap GTPase Der [der]. 149 624 IPR016484 GO:0005525
Car06g03639 653 MobiDBLite consensus disorder prediction 627 645 - -
Car06g03639 653 ProSiteProfiles EngA-type guanine nucleotide-binding (G) domain profile. 358 538 IPR031166 GO:0005525
Car06g03639 653 Gene3D - 147 353 IPR027417 -
Car06g03639 653 PRINTS GTP1/OBG GTP-binding protein family signature 152 172 IPR006073 GO:0005525
Car06g03639 653 PRINTS GTP1/OBG GTP-binding protein family signature 249 267 IPR006073 GO:0005525
Car06g03639 653 Gene3D - 540 624 IPR015946 -
Car06g03639 653 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 343 IPR027417 -
Car06g03639 653 TIGRFAM small_GTP: small GTP-binding protein domain 358 525 IPR005225 GO:0005525
Car06g03639 653 Pfam 50S ribosome-binding GTPase 151 298 IPR006073 GO:0005525
Car06g03639 653 Pfam 50S ribosome-binding GTPase 360 481 IPR006073 GO:0005525
Car06g03639 653 Pfam KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 540 621 IPR032859 -
Car06g03639 653 CDD EngA2 360 533 - -
Car06g03639 653 Gene3D - 354 538 IPR027417 -
Car06g03639 653 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 318 627 IPR027417 -
Car06g03639 653 CDD EngA1 153 341 - -
Car06g03639 653 PANTHER GTP-BINDING PROTEIN 129 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03639 Car-Chr6 67684601 67695152 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03639 - - gmx:100777588 1001.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03639 06 67684601 67695152 Car06g03639 06 67684601 67695152 ECH