Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03622 ATGCATCAGGCTTGTTTGTGTGCGTTCCCAAATCCAACTTCTACTCTTCCAATTCACTCAAATGCCAATGCTTCCTGTTATTCTACAAAACCATCACATTCCCACTCCCAAACACACCACAACTGGTCTCTTCAAGGCATGACAGCTCTTGTCACCGGTGGAACTCGCGGAATCGGGCATGCCATTGTGGAGGAATTGGTGGGGTTTGGTGCCAAAGTTCATACTTGTGCTAGAAATGAAGATGATCTCAATAAGTGTCTCAATGAATGGAATCATTTGGATTTTGAGGTTACTGGTTCAATTTGTGATGTGTCAGTTCCACACCAGAGGGACTTGCTTATGGAGACTGTCTCCTCTCTCTTCCATGGGAAACTCAACATCCTTATAAACAATGTAGGGACAAACATTCGGAAACCAATAACAGACTTCACAACTGCAGAGTTTTCCAAACTCATTGATACCAATTTAGGATCCACCTTTCATATGTGCCAACTTGCATATCCACTTCTCAAAGCATCGGGAGTGGGTAGTGTTGTTTTTATCTCTTCTGTTTCAGGTTTTGTCTCACTGAAGTCAATGTCTGTTCAAGGAGCAACAAAAGGGGCAATTAATCAACTTACAAAGAATCTAGCTTGTGAGTGGGCAAAAGACAACATAAGGAGTAATGCAGTTGCACCTTGGTACATCAGAACTTCGATGGTAGAACAAGTTCTGAGCAACAAAGACTATCTTGAAGAGGTGTACTCTCGAACTCCTCTTAGACGCCTTGGAGATCCAGCTGAAGTGTCTTCTCTTGTCGCCTTTCTTTGCTTACCAGCATCGTCATACATCACTGGCCAGATTATATGTGTCGATGGAGGAATGTCTGTGAATGGTTTCTCCCCAACACAGATCTAA 897 0.4303 MHQACLCAFPNPTSTLPIHSNANASCYSTKPSHSHSQTHHNWSLQGMTALVTGGTRGIGHAIVEELVGFGAKVHTCARNEDDLNKCLNEWNHLDFEVTGSICDVSVPHQRDLLMETVSSLFHGKLNILINNVGTNIRKPITDFTTAEFSKLIDTNLGSTFHMCQLAYPLLKASGVGSVVFISSVSGFVSLKSMSVQGATKGAINQLTKNLACEWAKDNIRSNAVAPWYIRTSMVEQVLSNKDYLEEVYSRTPLRRLGDPAEVSSLVAFLCLPASSYITGQIICVDGGMSVNGFSPTQI 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03622 298 Pfam Enoyl-(Acyl carrier protein) reductase 55 289 - -
Car06g03622 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 123 134 IPR002347 -
Car06g03622 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 176 184 IPR002347 -
Car06g03622 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 196 215 IPR002347 -
Car06g03622 298 PANTHER TROPINONE REDUCTASE-LIKE PROTEIN, CHLOROPLASTIC 25 297 - -
Car06g03622 298 PRINTS Glucose/ribitol dehydrogenase family signature 48 65 IPR002347 -
Car06g03622 298 PRINTS Glucose/ribitol dehydrogenase family signature 123 134 IPR002347 -
Car06g03622 298 PRINTS Glucose/ribitol dehydrogenase family signature 170 186 IPR002347 -
Car06g03622 298 PRINTS Glucose/ribitol dehydrogenase family signature 196 215 IPR002347 -
Car06g03622 298 PRINTS Glucose/ribitol dehydrogenase family signature 217 234 IPR002347 -
Car06g03622 298 PRINTS Glucose/ribitol dehydrogenase family signature 252 272 IPR002347 -
Car06g03622 298 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 45 290 IPR036291 -
Car06g03622 298 Gene3D - 28 293 - -
Car06g03622 298 PANTHER TROPINONE REDUCTASE 25 297 IPR045000 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03622 Car-Chr6 67526169 67528903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03622 41 294 Miscellaneous Gene Families AT2G29290 62.992 2.03e-117 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03622 K08081 - gmx:100799534 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03622 06 67526169 67528903 Car06g03622 06 67526169 67528903 ECH