Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03617 ATGGCATCATCAACTACTCTCTTCAATTTCAAGCTTCCTCCCCTGTTCAACTCACTTCACCATCCAAGGGTAAATAGGTCAAAAGCCCCATTTTCTTCTCGCATCATCATTTCTTCCGTTAACAATCATTTGGCGCCAACACGTGTCACTTATCCGCTTCTCACCTCCCACTCTGTTCATAATCGCAGAAGATTCCACGTTCAAGCGCAGCAAAAGGAGTATTCTGCAGGGAACAATTCCGAGTCGGTTGTTTCAGACGCTACTAACAAAGAGGAATTTTCTTGGTCTTCTGTGATTCTTCCGTTTGTGTTCCCTGCATTGGGAGGCTTGTTATTTGGTTATGATATTGGTGCCACATCCGGTGCTGCAATTTCACTGCAGTCACCTGAGCTTAGCGGTATCAGTTGGTTCAATCTTTCTGCCATTCAGCTCGGTCTTGTGGTCAGTGGTTCCCTATATGGGGCTCTTCTTGGATCACTTCTTGCATTTGCCATTGCCGATTACATTGGGAGGAAGCGGCAACTCATTGGTGCAGCCGTGTTGTATCTACTTGGTAGTGCAATCACTGCCTCTGCACCAGAACTTGGTGTTCTCTTAGCAGGAAGGCTTCTTTATGGACTTGGTATAGGTCTGGCCATGCATGGAGCTCCTTTATACATTGCAGAAACTTGTCCATCACAAATTCGCGGGACTCTAGTATCATTAAAAGAACTATTCATTGTCCTGGGGATTCTGTTAGGTTATTTTGTGGGAAGCTTTCAGATTAGTTCAGTTGGGGGATGGCGGTTCATGTATGGATTTAGTGCTCCGCTTGCTATGCTAATGGGGCTTGGAATGTGGACTCTCCCTTCATCTCCACGGTGGTTGCTTCTCAAAGCAGTACAAGGAAAAGGTTCTTTTCAAGACTTGAAGGAAAAGGCAATTGTTTCTCTTAGCAAATTAAGGGGCCGACCACCTGGTGACAGAGAATCTGAGAGGCAGATTGAAGAGACTGTTGTCTCGTTGAAGTCTGCCTATGAAGATCAGGAATCCGGGGAGAATTTCTTAGAGGTGTTTCAGGGTCCAAATCTGAAAGCGTTCGTAATTGGTGGGGGGCTAGTATTATTTCAACAGATAACAGGTCAACCTAGTGTTCTGTATTACGCGGGTCCAATTCTTCAGAGTGCTGGATTTTCTGCTGCATCTGATGCGGCTAAAGTTTCAGTTGTTATCGGCTTATTCAAGTTAGCAATGACATGGATTGCTGTCCTGAAAGTAGATGATTTGGGGAGAAGACCTTTGCTGATTGGAGGTGTCAGTGGCATTGCCATATCTCTAGTTTTGCTTTCTGCTTATTATAAGTTTCTCGGAGGGTTACCAATTGTTGCTGTTGCGGCTTTACTTCTTTACGTTGGATGTTACCAGATATCATTCGGGCCAATAAGTTGGCTTATGGTATCAGAAATCTTCCCACTTCGCACTAGAGGACGGGGGATCAGTATGGCTGTTCTTACCAACTTTGCTGCAAATGCTGTTGTTACCTTTGCATTCTCACCATTAAAGGAGTATCTAGGAGCAGAGAACCTTTTTCTCCTTTTTGCAGCCATTTCTTTACTGTCACTTCTGTTCATTGTATTTTCTGTCCCGGAGACAAAAGGCTTGAGCTTAGAAGAAATCGAATCCAAATTCTTGAAGTGA 1677 0.4436 MASSTTLFNFKLPPLFNSLHHPRVNRSKAPFSSRIIISSVNNHLAPTRVTYPLLTSHSVHNRRRFHVQAQQKEYSAGNNSESVVSDATNKEEFSWSSVILPFVFPALGGLLFGYDIGATSGAAISLQSPELSGISWFNLSAIQLGLVVSGSLYGALLGSLLAFAIADYIGRKRQLIGAAVLYLLGSAITASAPELGVLLAGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLVSLKELFIVLGILLGYFVGSFQISSVGGWRFMYGFSAPLAMLMGLGMWTLPSSPRWLLLKAVQGKGSFQDLKEKAIVSLSKLRGRPPGDRESERQIEETVVSLKSAYEDQESGENFLEVFQGPNLKAFVIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAASDAAKVSVVIGLFKLAMTWIAVLKVDDLGRRPLLIGGVSGIAISLVLLSAYYKFLGGLPIVAVAALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISMAVLTNFAANAVVTFAFSPLKEYLGAENLFLLFAAISLLSLLFIVFSVPETKGLSLEEIESKFLK 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03617 558 ProSitePatterns Sugar transport proteins signature 2. 204 229 IPR005829 GO:0016021|GO:0022857|GO:0055085
Car06g03617 558 Pfam Sugar (and other) transporter 104 556 IPR005828 GO:0016021|GO:0022857|GO:0055085
Car06g03617 558 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 3, CHLOROPLASTIC 49 558 - -
Car06g03617 558 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 2 49 558 - -
Car06g03617 558 CDD MFS_GLUT10_12_Class3_like 104 552 - -
Car06g03617 558 Gene3D MFS general substrate transporter like domains 92 558 IPR036259 -
Car06g03617 558 PRINTS Sugar transporter signature 109 119 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car06g03617 558 PRINTS Sugar transporter signature 199 218 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car06g03617 558 PRINTS Sugar transporter signature 370 380 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car06g03617 558 PRINTS Sugar transporter signature 457 478 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car06g03617 558 PRINTS Sugar transporter signature 480 492 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car06g03617 558 ProSiteProfiles Major facilitator superfamily (MFS) profile. 101 545 IPR020846 GO:0022857
Car06g03617 558 ProSitePatterns Sugar transport proteins signature 1. 162 179 IPR005829 GO:0016021|GO:0022857|GO:0055085
Car06g03617 558 SUPERFAMILY MFS general substrate transporter 87 553 IPR036259 -
Car06g03617 558 TIGRFAM SP: MFS transporter, sugar porter (SP) family 92 552 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03617 Car-Chr6 67485870 67492372 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03617 17 558 Organic Solute Cotransporters AT5G59250 71.875 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03617 - - cam:101513727 873.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03617 06 67485870 67492372 Car06g03617 06 67485870 67492372 ECH