Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03609 ATGTCCATGCAGAACAAAATGTTGGACTCTGTTCCTTCATCACAGGCCCTTTTTGGGGTTTTTCTCTTTGCCACAAGTTTCCTCTGGACCTTCCCTGAATTTGTTCTGGCTACTTCACACCACGGAAGTGTTACAAGGCACTACAAATTCGATATAAGGCTAGCAAACGTCACGAGGCTGTGTCACACAAAAAGCATAGTTACCGTGAACGGAAAGTTCCCGGGGCCTCGAGTCGTTGCAAGAGAAGGGGACAGAATATTGATTAAGGTTGTTAATCATGTTCCAAACAATATCACGTTGCATTGGCATGGAGTGAGACAGGTTCGTAGTGGTTGGTCAGATGGTCCATCATACATAACTCAATGCCCCATTAAAAGAGGGCAGAGTTATGTGTACAATTTCAGCATTGTTGGACAAAGAGGAACTCTGTTTTGGCATGCTCATTTCTCATGGTTAAGAGCTACTGTCTATGGACCTCTCATCCTTCTCCCCAGACACAACGAATCTTATCCATTTCTAAAACCCTACAAGGAACTCCCCATCCTCTTTGGTGAGTGGTGGAATGCAGATCCAGAAGCTGTTATTGCACAAGCACTTCAGACAGGGGGTGGCCCAAATGTCTCTGATGCCTACACCTTTAATGGACTTCCTGGACCTCTCTATAATTGCTCCAAAGATACATACAAATTGAAGGTGAAACCAGGAAAGACATATCTACTACGTTTAATTAACGCTGCACTCAACGATGAACTCTTCTTCAGCATAGCAAATCACACTTTAATTATCGTTGAAGCTGACGCTTCATACGTTAAACCATTTGAATCACACACCATCCTACTTGGGCCAGGACAAACCACAAATGTTCTTTTAAAAACAAAACCACAATACCCAAATGCCACATTTTTCATGCTAGCTAGACCATATTTCACTGGGATGGGCACTTTTGACAATTCCACAGTAGCTGGAATTTTAGAGTACACAAAAAATGTTGCTAATACTAATTCTAATGTAAATTCCTCAACCACTTCAAAATACTTTCCCTTGTTACCATCCATCAATGATACTACATTTGTTGCAAATTTTAGTAACAAATTTGTTAGTTTAAACAGTGTTAAATACCCTGCAAATGTACCAAAAACTATTGATAAAAACTTTTTCTTCACAGTGGGCCTAGGGACAAGTCCATGCCCAAAAAACCAAACATGTCAAGGACCAAATAATAGTTCAAAATTTGCAGGTTCAATGAACAATGAATCATTTGCTTTACCTTCAATAGCACTTCTGCAACAACATTTCTTTGGACAAGCTAATAATGGAATCTACACAACTGATTTTCCTGTTTTGCCCCTAAGGCCATTTAACTACACAGGAACACCTCCAAATAACACAAGGGTTAGTAATGGAACTAAAACAGTGGTGATACCTTATAATACTAGAGTACAGGTTGTACTACAGGACACAAGCATTTTGGGAGCTGAGAGTCACCCTTTGCATCTTCATGGATTCAATTTCTTTGTAATTGGTCAAGGTTTTGGAAATTTTGATCCTAGTAATGACCCTAATAAGTTCAATCTTGTTGATCCTGTTGAGAGGAACACTGTTGGTGTGCCCGCAGGTGGTTGGGTTGCCATACGCTTCTTGGCTGACAACCCAGGTGTGTGGCTGATGCATTGCCACTTTGATGTGCACCTAAGTTGGGGATTGAGGATGGCTTGGATTGTTGAGGATGGAAAGTTCCCTAATCAGAAATTACCACCTCCTCCTAAGGATCTCCCTAAGTGTTGA 1785 0.4095 MSMQNKMLDSVPSSQALFGVFLFATSFLWTFPEFVLATSHHGSVTRHYKFDIRLANVTRLCHTKSIVTVNGKFPGPRVVAREGDRILIKVVNHVPNNITLHWHGVRQVRSGWSDGPSYITQCPIKRGQSYVYNFSIVGQRGTLFWHAHFSWLRATVYGPLILLPRHNESYPFLKPYKELPILFGEWWNADPEAVIAQALQTGGGPNVSDAYTFNGLPGPLYNCSKDTYKLKVKPGKTYLLRLINAALNDELFFSIANHTLIIVEADASYVKPFESHTILLGPGQTTNVLLKTKPQYPNATFFMLARPYFTGMGTFDNSTVAGILEYTKNVANTNSNVNSSTTSKYFPLLPSINDTTFVANFSNKFVSLNSVKYPANVPKTIDKNFFFTVGLGTSPCPKNQTCQGPNNSSKFAGSMNNESFALPSIALLQQHFFGQANNGIYTTDFPVLPLRPFNYTGTPPNNTRVSNGTKTVVIPYNTRVQVVLQDTSILGAESHPLHLHGFNFFVIGQGFGNFDPSNDPNKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWLMHCHFDVHLSWGLRMAWIVEDGKFPNQKLPPPPKDLPKC 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03609 594 CDD CuRO_1_LCC_plant 48 164 IPR034288 GO:0005507
Car06g03609 594 Pfam Multicopper oxidase 179 328 IPR001117 -
Car06g03609 594 Pfam Multicopper oxidase 458 577 IPR011706 GO:0005507|GO:0016491
Car06g03609 594 TIGRFAM laccase: laccase 45 594 IPR017761 GO:0046274|GO:0048046|GO:0052716
Car06g03609 594 ProSitePatterns Multicopper oxidases signature 1. 552 572 IPR033138 -
Car06g03609 594 SUPERFAMILY Cupredoxins 374 594 IPR008972 -
Car06g03609 594 CDD CuRO_2_LCC_plant 180 326 IPR034285 -
Car06g03609 594 Pfam Multicopper oxidase 55 165 IPR011707 GO:0005507
Car06g03609 594 Gene3D - 397 594 IPR008972 -
Car06g03609 594 Gene3D - 176 371 IPR008972 -
Car06g03609 594 PANTHER MULTI-COPPER OXIDASE 24 594 IPR045087 -
Car06g03609 594 SUPERFAMILY Cupredoxins 42 191 IPR008972 -
Car06g03609 594 PANTHER LACCASE-17 24 594 - -
Car06g03609 594 CDD CuRO_3_LCC_plant 440 577 IPR034289 GO:0005507
Car06g03609 594 ProSitePatterns Multicopper oxidases signature 2. 557 568 IPR002355 GO:0005507
Car06g03609 594 Gene3D - 34 163 IPR008972 -
Car06g03609 594 SUPERFAMILY Cupredoxins 172 368 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03609 Car-Chr6 67430045 67433606 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03609 K05909 - gmx:100811833 1019.22