Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03580 ATGACGGTTACGCCGCACGAAGGTAAAGGACAGTGTCCCGTAGTGGGTTGCAAGGCGGACCTTGTTGCCACGTGTCCAAGTCCTTTGCAACACCGCGTTCCGTTGGGTAATGGTCCTGTTGTTGCGTGTAAGAGTGGGTGTGAAGCTTTTCACACGGATGAACTTTGTTGTAGGAATCATTTCAATAACCCTCAAACTTGTAAGCCTTCGGTTTATTCCACTTATTTTAAGCACGCGTGTCCTGCTACCTTCACTTTTGCTCATGATTCTCCTTCTTTGACTCACGAGTGTTCTTCTCCGCGTGAGCTTAAGGTTATCTTTTGCCATTGA 330 0.4727 MTVTPHEGKGQCPVVGCKADLVATCPSPLQHRVPLGNGPVVACKSGCEAFHTDELCCRNHFNNPQTCKPSVYSTYFKHACPATFTFAHDSPSLTHECSSPRELKVIFCH 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03580 109 ProSiteProfiles Thaumatin family profile. 1 109 IPR001938 -
Car06g03580 109 SMART tha2 1 109 IPR001938 -
Car06g03580 109 Gene3D Thaumatin 1 108 IPR037176 -
Car06g03580 109 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 1 109 - -
Car06g03580 109 Pfam Thaumatin family 1 108 IPR001938 -
Car06g03580 109 PIRSF PR5 1 109 IPR001938 -
Car06g03580 109 SUPERFAMILY Osmotin, thaumatin-like protein 1 108 IPR037176 -
Car06g03580 109 PANTHER OS03G0233200 PROTEIN 1 109 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03580 Car-Chr6 67015854 67016183 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03580 1 108 Receptor kinase-like Gene Family AT5G38280 34.545 4.41e-19 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03580 - - cam:101503313 246.128