Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03576 ATGGGAGAGAGGATGGATAAGTCTAACTCGAGCATGAACCCTAATTCTAAACAAAGTAGTGCTATCAATGGTAAAAAAACGTACAACAAACAGCTGGTTGCATCGCGTCCTAAAGGCTTTGCGCAAAGATATTGTGAACCCCTTGTTTCATTGACGCATGGTGACTTTGGAAGCAGTGCTGTGGGACGTGCCACATTGTTTTTACTTAAAGTTGCTGCTTTAGAGACTGTACGGAGGTTTTCCAACAGTAAATGCCCGTGTTTGTGGCGAGGCCTGCAGGGTCTACAAATCCTTGTATACCCACCATTTAAATGGATTCAGAGGTGGGCTCCCTTCACGGGTTTGGTCAAAAGCATGCAGGTACTATCAAGACCATTATTAGTCCTTTCCATTGCAACAGTCTTTACTGATCCACCACAATGTAGTGATGGAACCTCAGATTGTATTATTGATTCTCCTGATTCAGAAATATCTGCAGAACCATCTCCTGTGCAAGATAATTTGAATACTAGTCAACCTGAGGGAGCTCCTAAAGTCTTAGAATATGAAAAATGGTTGACTCAACTCAATCAAGAGCTTGAAAATCAAGGGATTAGTTTGCCAGAAAGAATCAATGATGATGAGCTCGACAGATTTTATGCCGCTTCTAATAATGACTTTTCATGCTTCCTTACCTCAATCAAGAAGACGATACGCTGGCGGGAGTGTTACAAAATTCTTTCAGAAGAAGAGCTGGAAATGTGGTCAAATATGGTGTTCTGGCATGGATCTGATTTGTTGCAAAGACCTTGTCTCATTGTAAGGCTTGGGATAGCTTGCAGCTCCTTAGCATTCCAAGATAGACCTCGATTTGCTCAGGCAATTATATCACAGGTAGACTTTGGAGTCTTGCACTTAGTTGATAGAGACAACCCTCAAATTACAGTATTGGTAGACTGTGAAGGGTTATCTCCATTGAGAGTTCCCATGCAAATACTGAGGTCTTGTTCTTCCCTTCTGCAAGATCACTTTCCTAATCGTCTTGGTTGTTTGTATGTCATTCGACTTCCAGCAATTGCCCGTGTTATTGCCCAGACTTTTATTCAGGTTTTAAAGCCAGCTACTAAGAAAAAGTTGAAAATAGAAGGAGAGATGTACAAGAAGGTTCTTTATGACGATCTATCCACACTACCATCATATCTTGGAGGCAGCTGCACATGCGTCAAGTGTTCTAAAATGGGCAAGCACAATATGATACAACCTCATGAAACTGGGACCAGCAGTAGCAGGATTGATAGGGAGGATGATATCAGTGACTACAGTGATACGCCATCGCTGCATCAATCTATTGAATTAGATGGTCGCCAACACAGCAACTATGATCAGATGTTGAGAACTGCTGTCATAAGTATTCTGGTAGTTTGGGTTGTCGTAGCTCTTGGTGCTGGAATATATGAACCTAGTTTATAA 1449 0.4168 MGERMDKSNSSMNPNSKQSSAINGKKTYNKQLVASRPKGFAQRYCEPLVSLTHGDFGSSAVGRATLFLLKVAALETVRRFSNSKCPCLWRGLQGLQILVYPPFKWIQRWAPFTGLVKSMQVLSRPLLVLSIATVFTDPPQCSDGTSDCIIDSPDSEISAEPSPVQDNLNTSQPEGAPKVLEYEKWLTQLNQELENQGISLPERINDDELDRFYAASNNDFSCFLTSIKKTIRWRECYKILSEEELEMWSNMVFWHGSDLLQRPCLIVRLGIACSSLAFQDRPRFAQAIISQVDFGVLHLVDRDNPQITVLVDCEGLSPLRVPMQILRSCSSLLQDHFPNRLGCLYVIRLPAIARVIAQTFIQVLKPATKKKLKIEGEMYKKVLYDDLSTLPSYLGGSCTCVKCSKMGKHNMIQPHETGTSSSRIDREDDISDYSDTPSLHQSIELDGRQHSNYDQMLRTAVISILVVWVVVALGAGIYEPSL 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03576 482 SMART sec14_4 246 399 IPR001251 -
Car06g03576 482 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 242 402 IPR001251 -
Car06g03576 482 Pfam CRAL/TRIO domain 250 396 IPR001251 -
Car06g03576 482 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 12 481 - -
Car06g03576 482 SUPERFAMILY CRAL/TRIO domain 246 401 IPR036865 -
Car06g03576 482 MobiDBLite consensus disorder prediction 1 22 - -
Car06g03576 482 Gene3D - 180 432 IPR036865 -
Car06g03576 482 CDD SEC14 242 396 IPR001251 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03576 - - gmx:100814843 739.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03576 06 66981913 66988742 Car06g03576 06 66981913 66988742 ECH