Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03567 ATGTCGTTCACTTCAACTTCCAGAGGAAGAACAACAACAACCACCAGTCCGGAGAGGACTAAAGTTTGGACCGAGCCCAGGCCCAGGCCCAAAAAAGTTTCCGTCGTTTACTACCTATCCCGTAACGGCCAACTTGAACACCCTCATTTCATGGAAGTCCCTCTCTCTTCACCTCACGGACTCTACCTCAAAGACGTAATCATTCGCTTGAACCTTCTCCGTGGGAAAGCCATGTCAACTATGTACTCCTGGTCCTCTAAACGAAGTTACAAAAACGGCTTCGTTTGGCATGATTTATCGGAGAACGATTTCATCTATCCAACGCAGGGACAAGACTACATTCTCAAAGGATCGGAGATTCTCGATCACGCCGCTACCGCCGCCATTACTTCTAGGACTTCAGAGGAAGAAACTGATTCTCCGGTGGTGATTACGAGGCGGCGCAACCAGTCATGGAGCTCCATTGACTTGAACGAGTACCGAGTTTATAAGTCCGAGTCGTTAGGTGACTCAGTTGGAAACATCGCCGCCGACGCGTCGACTCAGACAGAGGACAAGCGAAGGCGGAGGAAGGTTGTGAGGgaaaaggaagaagaagaagaagaagagaaaaatgaaattgaaaacgaagaagttgaaacggaGGGAAGAGATCAAAATCAGAGTACGGAACTGAGTAGGGAAGAGATCTCGCCTCCACCGTCAGATTCGAGTCCCGAAACATTAGGAACGCTGATGAAAGTAGATGGACGGTTGGGATTGCGATCTTCGGTTCCTGCTAAGGAGAATCTAACGGCTGACAATTATCCTAGTGGAAGGATGAAAGCTTCATCGGTACTATTGCAATTATTATCGTGCGGTGCGGTGTCTTTGAAGGAAAGTATGAGTGGAACCGGTTCGGGTAAAGATCAACGGTTCTCATTGGTGGGGCACTACAAGTCTAGGCTCCCCCGCGGAGCAGGGAATCAAGAGGGAAAAGAAGTGGGGACTTTGATGGAAATTCCTGATTTGAGCAGGGTGAGATTGGAAGATAAAGAGTACTTTAGTGGGAGCTTGATCGAAACAAAAAAATTAGAAGCTCCTGCATTCAAGAGGTCCTCTTCTTACAATGCAGATAGCGGTTCCCGATTGCAAATCATGGAGCATGAAGATGTCGTGCGGGCAAAGTGCATACCAAGGAAGTCCAAGTCGCTAGCAACAAAGAAAGAAGAGGGCACTTCCAGTTGCATGGACATTGGTAGCCGTAGCCAACATGGAAGTAAAAGATTTGAGGCGCAACAATAG 1284 0.4611 MSFTSTSRGRTTTTTSPERTKVWTEPRPRPKKVSVVYYLSRNGQLEHPHFMEVPLSSPHGLYLKDVIIRLNLLRGKAMSTMYSWSSKRSYKNGFVWHDLSENDFIYPTQGQDYILKGSEILDHAATAAITSRTSEEETDSPVVITRRRNQSWSSIDLNEYRVYKSESLGDSVGNIAADASTQTEDKRRRRKVVREKEEEEEEEKNEIENEEVETEGRDQNQSTELSREEISPPPSDSSPETLGTLMKVDGRLGLRSSVPAKENLTADNYPSGRMKASSVLLQLLSCGAVSLKESMSGTGSGKDQRFSLVGHYKSRLPRGAGNQEGKEVGTLMEIPDLSRVRLEDKEYFSGSLIETKKLEAPAFKRSSSYNADSGSRLQIMEHEDVVRAKCIPRKSKSLATKKEEGTSSCMDIGSRSQHGSKRFEAQQ 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03567 427 PANTHER OS01G0839200 PROTEIN 10 395 - -
Car06g03567 427 MobiDBLite consensus disorder prediction 1 25 - -
Car06g03567 427 MobiDBLite consensus disorder prediction 210 224 - -
Car06g03567 427 MobiDBLite consensus disorder prediction 174 243 - -
Car06g03567 427 PIRSF UCP031043 1 415 IPR021182 -
Car06g03567 427 MobiDBLite consensus disorder prediction 394 427 - -
Car06g03567 427 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 10 395 IPR010369 -
Car06g03567 427 MobiDBLite consensus disorder prediction 181 198 - -
Car06g03567 427 MobiDBLite consensus disorder prediction 1 21 - -
Car06g03567 427 MobiDBLite consensus disorder prediction 225 242 - -
Car06g03567 427 Coils Coil 183 217 - -
Car06g03567 427 Pfam Protein SOSEKI, plant 33 373 IPR010369 -
Car06g03567 427 MobiDBLite consensus disorder prediction 402 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03567 Car-Chr6 66905163 66908831 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03567 - - gmx:100779732 570.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03567 06 66905163 66908831 Car06g03567 06 66905163 66908831 ECH